Gene Hore_21830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21830 
Symbol 
ID7313731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2373406 
End bp2374581 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content37% 
IMG OID643612636 
Producthistidine kinase 
Protein accessionYP_002509924 
Protein GI220933016 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00305219 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACAGA ATATTGACCC GTCCAGATCT CTGGAAAAGA TTCTTGAAAA GACAGTAGAA 
GTTTTAGCCG AGAGCAAGAA GGAGATATTT ACTATAGCCG AATCAATCCG CCGGGAATAT
GATAATATAA AGAGAGAACT AGATTTGATT AATGAGGAAA TAAATGAAGT TGTAGCTAAA
GTTGATAAGC TCCAGGAGGT TAACAGAATT GCGAGAATAA GGCTTATGGA AGTTAGCCGG
GATTTTGAAA AACATAGTGA ATATGATATC AAATATGCCT ATCAACAGGC TGAGGATACT
TCTGTCCAGA TAGCGGTATT AAGGGAAAAA GAAGAACAGT TAAAGAAGAG AAGGGCCGAA
CTTGAAAACA GGTTAATTAA TTTAAAAAGA AATATTGAAA AGGCAGAAAA TATGGTTTCC
AGAGTAGGGG TTGTTCATGA TTATTTACTT GGAGAATTAT CCAATTTAAG TGAGCAATTT
GATGATTTAA GACAAAAACA ACAGCTGGCC ATTAAAATAA TTCAGGCCCA GGAAGATGAA
CGGAAGAGGG TCGCCCGTGA AATTCACGAT GGACCGGCCC AGTCAATTGC CAATCTTGTC
TTTAGAGTGG AACTTGCTCA GAAACTTATG GACAAGGATT TAAAAAAGGC CAGGAATGAA
CTTGAGGATG TTAAAGAGCT GGTAAGATTA AGTATGCAGG AAGTCAGAAA AATTATTTAC
GACCTGAGGC CCATGTCTCT TGATGACCTT GGTTTAATTC CTACTTTAAG GCGTTATATA
AATAAATTCA ATGAACAGAC TAAAATCATT ATAGATTTTA ATATTTTGGG TCCAAAAAGG
CGGCTGCCAA ATACATATGA AATTACAATA TTTCGCTTAA TTCAGGAAGG TCTTAATAAC
ATTTATAAAC ACTCTAAAGC CAGTACAGGG ACTGTTACCC TGGAATATAC TCCTGAACAA
ATCAATATCT TAATCAGTGA TGATGGTATC GGGTTTAAAC CTGAAGAGGT GGGGGCCAAT
AAATTTGGCC TGGTAAGTAT GAGAGAGAGG TGTGAGTTGT TAGGAGGTAA ACTTGATCTT
TTTTCTGAAA AAAACAAAGG GACAAAAATA AAAATAACAT TACCAATAAA ACAAAGAGGT
GGGAAAGATG AAGCCGACAA AGGTATTAGT AGCTGA
 
Protein sequence
MGQNIDPSRS LEKILEKTVE VLAESKKEIF TIAESIRREY DNIKRELDLI NEEINEVVAK 
VDKLQEVNRI ARIRLMEVSR DFEKHSEYDI KYAYQQAEDT SVQIAVLREK EEQLKKRRAE
LENRLINLKR NIEKAENMVS RVGVVHDYLL GELSNLSEQF DDLRQKQQLA IKIIQAQEDE
RKRVAREIHD GPAQSIANLV FRVELAQKLM DKDLKKARNE LEDVKELVRL SMQEVRKIIY
DLRPMSLDDL GLIPTLRRYI NKFNEQTKII IDFNILGPKR RLPNTYEITI FRLIQEGLNN
IYKHSKASTG TVTLEYTPEQ INILISDDGI GFKPEEVGAN KFGLVSMRER CELLGGKLDL
FSEKNKGTKI KITLPIKQRG GKDEADKGIS S