Gene Hore_21520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21520 
Symbol 
ID7313390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2341691 
End bp2343097 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content38% 
IMG OID643612604 
ProductABC transporter related 
Protein accessionYP_002509892 
Protein GI220932984 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTG TTGTCAATGA TTTAAATAAT ATATCAGAAT TAGCTCACCA TGGACCTGAA 
GATTTGTTTA TTTCGGGCAT TCTATTAATA GGTTCCTTTA TAATAATGTT AGGAATGAAT
TTTAAATTAG CTTTATTTAC ATTTGCTATG ATACCGTTGA TGTTTATCTT TTCCCTGAAA
CTCGGTAACA GGATGCATCA GGCTTTCCGT GATATCAGAG AGAAGATAGC AGAGGTTAAC
TCCCAGATAG AAGACAGTTT GAGCGGGATC AGGGTTGTCA AGTCTTTTAC CAATGAAGAG
CTGGAAATGG AAAAATTTGA TTACGGTAAT GAGAGGTTTC GGCGCTCCCG TGAAATGGCC
ATGAAGACCA TGGCCCAGTT TTTTTCGGGG ATAAATTTTT TCAGTAACAT GATAACCCTG
ACTACCCTGG CGGCAGGTGG ATACTATATA TACCGGGGCC AGTTGTCGGC AGGAGAGCTG
GTAGCTTTTT TATTTTATGT TAACATGTTT ATGCAGCCTG TTCGCCGTCT TGTTCATTTT
AATGAACAAT TTCAGCGGGG GATGGCCGGT TTTAAAAGGT TTTTAGAGCT CCTGGCAGTT
GAACCCGAGA TTAAAGATAG GGAAGGAGCC AGGACTTTGA AAGTTAGAAA TGGCCATATT
GAATATAGAA ATGTCAGTTT TAGCTATGAT AATCATAAAA AGGTCTTGAA TAATATAAAT
CTAGAAGTTA AACCGGGGCA AACAGTTGCC TTTGTAGGTC CATCAGGGGC CGGAAAAACA
ACCCTCTGCA ATCTACTGCC CCGTTTTTAT GAAATTGATG GAGGACAGAT ATTTATTGAT
AATATCAATA TAAAGGATGT GACGTTATCT TCTTTGAGGA AGAATATAGG AATTGTCCAG
CAGGATGTCT TCCTTTTTAA TGGGACAATA AGGGATAATA TTAGATATGG GAAAATAGAT
GCTTCAGATA AAGAAATAAT AGAGGCTGCT AAAAAGGCAA ACGCCCATGA GTTTATAATC
AATCTTGAAA ATGGTTATGA TACCGAAGTC GGTGAAAGGG GAGTTAAATT ATCAGGTGGC
CAAAAGCAGA GGATTTCTAT TGCCCGTAGT TTCCTTAAAA ACCCGCCTAT TCTAATCCTG
GATGAAGCGA CATCTTCTCT TGATAATGAG AGTGAAAAGA TTGTCCAGGC TTCTCTGGAG
CGCCTTTCCC GTGATAGAAC GACCCTGGTT ATAGCCCATC GCTTATCTAC AATAATTAAT
GCTGATAAAA TATTTGTATT AACCGACCAG GGAATTGTAG AAGAAGGTAG GCATTCTGAA
TTGATTAAAA AGAAAAATGG TATATACCGG AAGTTATTCT TGAGTCAGTT TTCAGATTTG
AATAATATGC AGGAAGCTCT TGGTTAG
 
Protein sequence
MSRVVNDLNN ISELAHHGPE DLFISGILLI GSFIIMLGMN FKLALFTFAM IPLMFIFSLK 
LGNRMHQAFR DIREKIAEVN SQIEDSLSGI RVVKSFTNEE LEMEKFDYGN ERFRRSREMA
MKTMAQFFSG INFFSNMITL TTLAAGGYYI YRGQLSAGEL VAFLFYVNMF MQPVRRLVHF
NEQFQRGMAG FKRFLELLAV EPEIKDREGA RTLKVRNGHI EYRNVSFSYD NHKKVLNNIN
LEVKPGQTVA FVGPSGAGKT TLCNLLPRFY EIDGGQIFID NINIKDVTLS SLRKNIGIVQ
QDVFLFNGTI RDNIRYGKID ASDKEIIEAA KKANAHEFII NLENGYDTEV GERGVKLSGG
QKQRISIARS FLKNPPILIL DEATSSLDNE SEKIVQASLE RLSRDRTTLV IAHRLSTIIN
ADKIFVLTDQ GIVEEGRHSE LIKKKNGIYR KLFLSQFSDL NNMQEALG