| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21220 |
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| Symbol | |
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| ID | 7313360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2311862 |
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| End bp | 2312518 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612574 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_002509862 |
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| Protein GI | 220932954 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000000126863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAGGT ATAATTTAAA AGCAGAGGTG AGAAAGGATA CTGGTAAAGG TGTTGCCCGT
AAGTTAAGAA GAAATGGCTT AATTCCGGGG GTAATATATG GTAAAACCCG CAAACCCCAG
CCTCTGGCAG TAGATGCTAA AGACCTTAAT AAGGTTGTTG GTGGTAATGC TATTTTAGAT
ATGACTCTGG TTGATGGTGA CAAAGAGGAA AAAGAAACTG CAGTAGTAAA GGACTTACAG
AGAGATCCGG TTCAGGGAAA TATTCTCCAT GTTGATTTTC AGCATATTTC TATGACTGAT
AAGCTTACTG TTTCTGTTCC GGTTCATATT GTCGGTAATG CCAGGGGTGT TGTTGCTGGA
GGTGTTTTAC AGCAGTTAGC CAGGGAAATT GAAGTTGAAT GTTTACCAAC CGATATTCCT
GATGAAATAG AGGTTGATAT TACTGACCTT GGACTGGGGG ATTCACTGTC TGTAGGTGAT
ATAGAACCCC CTGCAAACAC CGATTTCATT ACTCCTGAAG ACGAAGTAAT AGTTACCATT
GTTGCTCCAT CTGAGGCTGT TGAGGAAGAA GTGCCTGCAG AAGATGAAGA AATTATGCCT
GAACCTGAAG TAATTGGTGA AGAAGATGAA GGTGATGAAG AGGAGCCTGA AGAATAA
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| Protein sequence | MERYNLKAEV RKDTGKGVAR KLRRNGLIPG VIYGKTRKPQ PLAVDAKDLN KVVGGNAILD
MTLVDGDKEE KETAVVKDLQ RDPVQGNILH VDFQHISMTD KLTVSVPVHI VGNARGVVAG
GVLQQLAREI EVECLPTDIP DEIEVDITDL GLGDSLSVGD IEPPANTDFI TPEDEVIVTI
VAPSEAVEEE VPAEDEEIMP EPEVIGEEDE GDEEEPEE
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