| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21190 |
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| Symbol | |
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| ID | 7313357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2306916 |
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| End bp | 2307473 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643612571 |
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| Product | transcriptional regulator, AbrB family |
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| Protein accession | YP_002509859 |
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| Protein GI | 220932951 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.609479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCCA CAGGTATAGT TAGAAGAATT GATGATCTGG GTAGAGTAGT AATACCAAAA
GAAATAAGAC GGACGATGAG AATAAGGGAA GGGGAACCAT TAGAGATATT TGTTGACCGG
GAAGGTGAGG TTATTTTAAA GAAATATTCC CCCATCGGGG AGTTAAGCGA GTTTGCCCAG
GAATATGCTG ATGCCCTGGC AGAAGAGACC GACCAGGCTG TGTTTATTTT AGATAGAGAT
GTAATCATTG CTGTTTCCGG GGTTTCCCGT AAGGTTTTTA TGGACAAACA AATAAGTCCA
GAAGCCGAAA AAGTGATGGA GGAACGACGG CCTAAATTAT TTAATGATAA AGGTATAGAG
GCATTTTGCA GTGAAGTCCC TGAAGGAGCT AATGATTATA ATTTATCCTC TTCAGTACTG
TCACCTATTA TTGTAGAAGG GGACCCCATC GGGGTTGTTG TTATCAGCTC CAAGGGGGAC
GGGAAAGAAG TTGGAGAACT GGAACTGAAA CTGGCCAACA CGGCAGCATC ATTTCTGGCT
AAACAGATGG AGCAATAG
|
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| Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTMRIRE GEPLEIFVDR EGEVILKKYS PIGELSEFAQ
EYADALAEET DQAVFILDRD VIIAVSGVSR KVFMDKQISP EAEKVMEERR PKLFNDKGIE
AFCSEVPEGA NDYNLSSSVL SPIIVEGDPI GVVVISSKGD GKEVGELELK LANTAASFLA
KQMEQ
|
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