Gene Hore_20940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20940 
Symbol 
ID7313327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2270102 
End bp2270884 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID643612541 
ProductPP-loop domain protein 
Protein accessionYP_002509834 
Protein GI220932926 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000000433533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA GACTTCCTAA AAGATATGTC AGAAAGGTTT CCAGGGCTAT TACAGAATTT 
GACATGATTG AAGAGGGGGA TAATATTCTG GTAGGGTTAT CGGGGGGCAA AGATAGTTCG
TTTTTATTAT ATGTCCTGGC CCTGATTAAC AGATATGCAT CCCTGGACTT TCGATTAGCA
GCTCTTACGG TAGATCTTGG TTTTGATGGA GGAAAGAATT ATTTTGATTA TCTAAAAAAT
TACTGTGATC GGCTGGGTGT TAAATACTAT GTATTAGAAA CTGAGATTGC CAGCTATATT
CTCAGTGAGA AAACTGAAAA ACCATGTGCC AGGTGTGCCC ATTTCAGAAA AGGGGCTATT
GTAGATTTTA TGAAAGAAAA TGGTTTTAAT AAGATTGCCT ATGGGCATCA TTATGATGAT
GCTGTAGAAA CCTTTTTGAT GAGTATTCTT TATGCCGGGC AGGTAAAAAC CTTTTTACCG
AAGACATATC TTTCCAGGAA CGAGGTATAT GTTATCAGGC CCCTTGTTTA TTTACGGGAG
AGTGAAATTA TAAGAGCCCG GAAGTACATG GATTATAATC CCCCGGAGAG TCCCTGTCCC
TATGATGGCC AGACTACCAG GGATAAGGTT AAAAAATTGC TCAGAGAACT GGCCAGTGAT
AAACAGATTT TTTACAATAT TGCTGCTGCC ATGAGGGAAG GTTCTGTTAT TGACCTCTGG
CCGGAAAAAC CCCCCCAGGA AGAAATTATT GAAAGATCTA AAAAGCTATG GACATCTAAT
TGA
 
Protein sequence
MKLRLPKRYV RKVSRAITEF DMIEEGDNIL VGLSGGKDSS FLLYVLALIN RYASLDFRLA 
ALTVDLGFDG GKNYFDYLKN YCDRLGVKYY VLETEIASYI LSEKTEKPCA RCAHFRKGAI
VDFMKENGFN KIAYGHHYDD AVETFLMSIL YAGQVKTFLP KTYLSRNEVY VIRPLVYLRE
SEIIRARKYM DYNPPESPCP YDGQTTRDKV KKLLRELASD KQIFYNIAAA MREGSVIDLW
PEKPPQEEII ERSKKLWTSN