Gene Hore_20830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20830 
Symbol 
ID7313316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2253970 
End bp2256279 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content38% 
IMG OID643612530 
ProductKojibiose phosphorylase 
Protein accessionYP_002509823 
Protein GI220932915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA AAAACAACTT ATACACAGAA ACAGGATGGG AAATATTTGA AAGAGAATAT 
GAAGATGAGC AGATGGTTAC TACCGGTAGT AACTATCTTA TAGGTAATGG TTATCTGGGA
TACAGGGGAA CCTTTGCTGA CTGGACTGCT AATGAGTATG TAGCCTGTAT AGTTACTGAT
ACTTATGATA TGGCTGATGG GAAATGGCGT GAATTATGTA ATGCTCCCAA TGGACTTTAT
ACCAGACTTG AAGTAGATGG GGAAAGAGTA ACCATTAACA AAGGTGAGAT CAGTAATTAC
AGAAGAGGGC TAAACCTGAG AGAAGGGTTA TACTCAGAGG AATTTACCTG GAAGGGTAAT
AAAGGGAATA AAGTCCATAT TGAAACAGCC CGTTTTGCCA GTTATCACAA TCTTCATTTA
ATTCCCTTCC GTTATAGCTT TACCGTTGAA AAAGAAGCAG AAATAACCCT GGTTACCGGT
ATTGATGGAG TGGTGTGGAG TTTAAACGGT GAACATTTTA AAAAATATGA CCTTAAAAAA
ATAGACAAAT ATCTGGCTAT TGAAACTGTT ACCGGAGAGA GGGGGATCCA GCTTGATGTA
GTTGAAGGAT ATAGACTTGA TGGTGCTACT CCCCGGTTTG AAAAAATAAT CAAAGAAGAC
AGGAAAATAT TAAGGGAATT GAAATTCAAA CTAAGTCCCG GTACCAGGGT TGTACTGGAA
AAAGTTATAA GTATATATTC GAGTAATGAT ATCAAGAATC CTTTAGACCA GGCCCAAAAA
GATCTGGAAA AGGCCCTTCA GTCTACTTTT ACTGAGCTTA GAGAAAAAAA CAGGGCTAAC
TGGATAAATT TCTGGAATAG AACCGATATA AAAATTAAGG GAGATTTAAA GGGGCAAACA
GCTCTTCGAT TCAATTTATA TCATAACAGA ATTGCGACCC CTGCCCACAG TGATAGGTTA
CCCATCGGGG CCCGGGGGCT TTCATGTCAG GCTTATCAGG GGGCTGCCTT CTGGGATCAG
GAAATCTTTA ATATGCCTAT GTTCCTTTAC ACCAGTCCTG AAACTGCCTG TAATATTTTG
AAATACCGTT ACCACACCCT TGATGGGGCC AGAAAAAAGG CCAGAAAACT GGGTTACAGG
GGTGCTTTTT ATGCCTGGGT CAGTGGAAAA ACTGGTGAAG AATTATGTCC CTCATATTTC
TTTAAAGATG TTATTAGTGG GCGGAAAATT CATAACCATT TTAATGACTG GCAGATCCAT
ATTTCACCTG ATATTGCCTA TGCCATCTGG CATTATTTCC AGGTTACAGG TGACTGGAAT
TTTATTGTTA ATTACGGAGC TGAAATGATT TTTGAAATAT CCCGGTTCTT ATATTCCCAT
GCTTATTTTA AAAAAGACAA AAACAGGTTT GAGTTTATCA GGTTGTTGGG GCCTGATGAA
TATCATGAAA ATGTTGATAA TAACGCCTTC ACCAATTATC AGGCTAAATA TACCCTGGAG
CGAGCTCTTG ATATTTATAA TAAAATGAAA GACGAGAATA AAAAAGAGCT GGAATACTTA
ATGGAAAAAA TAGAGTTAAC GGAAAAGGAA ATTGAAGACT GGAAAGAGAT GGCTGAACTT
ATTTACCTCC CTCAACCTGA TGAAGAAACT TTATTAATAG AACAGTTTGA TGGCTATTTT
GATCTAGAAG ATACCCGCCC TGATGAGCTG GAGAAGAGAT TGTTAGACCC TGGTGAGTAC
TGGGGTTGGC CCAATGGGGT GGCTGTGGAG ACCCAGGTTA CCAAGCAGGC TGATGTTATC
CAGTTATTCT GCCTCCATAA CATTTTCAGT AAAGGAGTTA TGAAGGCTAA TTATGACTAT
TATGAACCCC GGACCCAGCA TGGTTCTTCA TTGAGCCCGT CAGCCTATTC CATTATAGCC
AGCCAGATAG GTTATGTAGA GGAAGCCTAC AGTTATTTTA TAAAATCCTG TACTATTGAT
CTTTATAACA CAAACAAAGC TGTCAGCGGG GGCACTTTTA TTGGAGGAAT TCATACAGCA
GCCTGTGGAG CAGCCTGGCA GATGGTGGTA TTTGGATTTG CCGGGTTAAA AATAGATAAT
GATAATCTCA GTTTTAATCC AGTTTTACCC TCTAAATGGG ATGAAATTAA CTTCCCCCTT
CAATATAAAA ATAACAGATT TAATGTAGTA ATTACAAAAA GCCAGCTTAA AGTTAAATCA
TCAGAAGAAA ATAAAGAAAC ACAAAAAATT AGATATAAGG ATGATTTAAC TGAAATCAGA
CCAGGGGATG AAGTAATTAT ACCATTTTAA
 
Protein sequence
MELKNNLYTE TGWEIFEREY EDEQMVTTGS NYLIGNGYLG YRGTFADWTA NEYVACIVTD 
TYDMADGKWR ELCNAPNGLY TRLEVDGERV TINKGEISNY RRGLNLREGL YSEEFTWKGN
KGNKVHIETA RFASYHNLHL IPFRYSFTVE KEAEITLVTG IDGVVWSLNG EHFKKYDLKK
IDKYLAIETV TGERGIQLDV VEGYRLDGAT PRFEKIIKED RKILRELKFK LSPGTRVVLE
KVISIYSSND IKNPLDQAQK DLEKALQSTF TELREKNRAN WINFWNRTDI KIKGDLKGQT
ALRFNLYHNR IATPAHSDRL PIGARGLSCQ AYQGAAFWDQ EIFNMPMFLY TSPETACNIL
KYRYHTLDGA RKKARKLGYR GAFYAWVSGK TGEELCPSYF FKDVISGRKI HNHFNDWQIH
ISPDIAYAIW HYFQVTGDWN FIVNYGAEMI FEISRFLYSH AYFKKDKNRF EFIRLLGPDE
YHENVDNNAF TNYQAKYTLE RALDIYNKMK DENKKELEYL MEKIELTEKE IEDWKEMAEL
IYLPQPDEET LLIEQFDGYF DLEDTRPDEL EKRLLDPGEY WGWPNGVAVE TQVTKQADVI
QLFCLHNIFS KGVMKANYDY YEPRTQHGSS LSPSAYSIIA SQIGYVEEAY SYFIKSCTID
LYNTNKAVSG GTFIGGIHTA ACGAAWQMVV FGFAGLKIDN DNLSFNPVLP SKWDEINFPL
QYKNNRFNVV ITKSQLKVKS SEENKETQKI RYKDDLTEIR PGDEVIIPF