Gene Hore_20530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20530 
Symbol 
ID7314377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2217095 
End bp2218120 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content38% 
IMG OID643612497 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002509793 
Protein GI220932885 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA CTTTAAAAGA TGTGGCGAAA AAGGCCGGGG TTTCACTGGC GACAACCTCT 
CTGGCTTTAA ATGAAAGTGA TAAAGTTAAA GAAGAAACTT ATCTAAAAGT TCACCGGGTA
GCCCGGGAGT TAAATTACAT ACCAAATGCC AGAGCCCGTG CTCTGGTTAA AAGAAAAACA
AGAGCCGTGG GACTGGTAAT ACCTGAAGTT GAAAACCCAT TTTTTGCTGA GTTATCTCAG
GCAATAAAGG ATACTTTGCA TAAAAAGAAA TATAATGTAA TTCTGTGTAG TACAGATTAT
AAAACCGAAG AAGAAATCAG GTATATTAAC CTTTTTAAAA GCGGTATGGT TGATGGTGCC
ATTTTTGCCT GTCTTGGTGA GATGATGAAA GGAAATAATG AGCTAATCCT GGACCTTGCC
AGAAACCATG TCCCTGTTGT TTATATTGAC AGGGAAAGTT CAGATAATGA ACTTATACCC
GTTATTAAAT CTGATTTAAA AGAAGGTTCT TATAAACTGA CCAAATACTT AATTGAACTG
GGGCATGAGG ATATAGGGTT TGTCGGTCAG AGCCTTGAAA GGATGGAAGG CTATAAAAAG
GCTATGGCTG AATACAATTT ACCGGTAAAA GATAAGTTCC TGTTTTATAA CTATCTTACC
ATTGAGGGTG GCATTGAAGT AGGCACAAAA CTGCTTAACT ATGACCGACT TCCCACAGCT
CTGGTTTGTT TAAATGACGA GATGGCTATC GGAGTTTTAC AGGCTTTAAC CAGGGAAGGA
ATCAGGGTTC CAGAGGATAT TTCTATCTGT GGGATTGATA ATATTAAAAT ATCAAACTTT
TATAACCCTC CCCTGACTAC AGTAAATGTT CCCAAAAAAG AGATGGGGAA AAAGGCGGCA
GAACTGCTCC TTAAACTAAT ATTTGAGGAG CATGTTGATA AAAATGAACA ATTTATAATA
TACAACACCG ACTTAATTAT CAGACGTTCA GCTACATCAC CCCGGAAAAC AAATATATTA
TTATAA
 
Protein sequence
MAVTLKDVAK KAGVSLATTS LALNESDKVK EETYLKVHRV ARELNYIPNA RARALVKRKT 
RAVGLVIPEV ENPFFAELSQ AIKDTLHKKK YNVILCSTDY KTEEEIRYIN LFKSGMVDGA
IFACLGEMMK GNNELILDLA RNHVPVVYID RESSDNELIP VIKSDLKEGS YKLTKYLIEL
GHEDIGFVGQ SLERMEGYKK AMAEYNLPVK DKFLFYNYLT IEGGIEVGTK LLNYDRLPTA
LVCLNDEMAI GVLQALTREG IRVPEDISIC GIDNIKISNF YNPPLTTVNV PKKEMGKKAA
ELLLKLIFEE HVDKNEQFII YNTDLIIRRS ATSPRKTNIL L