Gene Hore_20380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20380 
Symbol 
ID7314362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2197155 
End bp2197778 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID643612482 
ProductdTMP kinase 
Protein accessionYP_002509778 
Protein GI220932870 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGGGT TATTTATTAC CCTGGAAGGT ATAGAGGGTT CCGGGAAATC TACTCAGATA 
GAAATGCTTT ATAAGAGGTT AAAAAAGGAC GGTTTTGATG TTATTATAAC CAGGGAGCCA 
GGTGGCACCC CAATTGGGAA AGAAATAAGG AAGCTTTTAT TAGATCCTGA TAACATTATG 
GGGGCTAAAG CTGAATTTTT ATTATATGCT GCTGACAGGG CTCAGCATGT AGTAGAGCTG 
ATAAAGCCAG CCCTGGAGAG TGGAAAGGTT GTCCTTGCTG ATAGGTTTAT CGATTCAAGT 
ATTGCCTATC AGGGTTATGG AAGAGGGCTC GATATAGATG TAGTTAAAAC TGTAAATGAA 
TGGGTAATTG ATGGGTGCTG GCCTGACCTT ACTTTTGTTC TGGATCTGGA TGTAGAGAAG 
GGATTAGAGA GAGCCAGGGG TTATTCTCCA GACAACCAGG GAGACAGGCT GGAAAGGGAA 
TTAGTAACGT TTCATAGAAG GGTAAGACAG GCCTATCATC AGCTTGCAGA GGATAGGAGA 
TTTATTATGC TGGATGCAGA TCGTTCCCGT GAAGAAATAC ACCGGGAAAT ATATCATAAG 
GTAAAGGGGT GTTTAATTAA ATGA
 
Protein sequence
MRGLFITLEG IEGSGKSTQI EMLYKRLKKD GFDVIITREP GGTPIGKEIR KLLLDPDNIM 
GAKAEFLLYA ADRAQHVVEL IKPALESGKV VLADRFIDSS IAYQGYGRGL DIDVVKTVNE 
WVIDGCWPDL TFVLDLDVEK GLERARGYSP DNQGDRLERE LVTFHRRVRQ AYHQLAEDRR 
FIMLDADRSR EEIHREIYHK VKGCLIK