| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_20300 |
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| Symbol | |
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| ID | 7314354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2189439 |
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| End bp | 2191400 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643612474 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_002509770 |
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| Protein GI | 220932862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000027518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA AAACATTTTA TGTGACAACT CCTATTTACT ATCCCAGTGA CAGATTACAC
ATTGGTCATG CCTATACCAC TGTAGCAGCT GATACTCTGG CCAAATTCAA AGAGATGCAG
GATTATGATA CCATGTTTTT GACAGGTTCT GATGAACATG GTCAGAAGAT TGAGAGAAAA
GCAAGTGAAG CGGGTAAAAA ACCCGGAGAA TATGTTGATG AAATTGTTGC TACTTTTAAG
GATTTATGGA AGAGACTTGG GGTGGATTAT GATTACTTTA TCAGGACAAC CAACCCTGAC
CATGAAAAGG TGGTCCAGGA GATTTTCAAA AAGATATATG AGAAGGGAGA TATTTATAAA
GGGAAATATG AAGGATGGTA CTGTACTCCC TGTGAAACTT TCTGGACTGA AAGGCAGTTA
GAAGGGGAAA AGGTCTGTCC TGACTGTGGA CGTCCGGTTG AATGGGTAGA AGAAGAGAGC
TATTTCTTTA AATTAAGTAA ATATGCTGAC CGTCTTCTGG AACATATTAA AAAACACCCG
GAATTTATTC AACCTGAAAG CCGTCGTAAA GAAATGATAA ATTTCATTGA ATCTGGCCTT
GAAGACCTCA GTGTTTCCCG AACAACCTTT GACTGGGGAA TACCGGTTCC CATAGATGAT
GATCATGTTA TCTATGTGTG GTTTGATGCC TTAAGTAATT ATATAAGCGC TATTGGGTAT
TTATCTGATG ATAAAAAGTT TAATCATTAC TGGCCGGCTG ATGTCCATAT TGTTGGTAAG
GATATTCTGA GATTCCATAC CATTATCTGG CCTATAATTT TAATGGCCCT CGACCTGCCC
TTACCTAAAA AGGTGTTCGG CCATGGCTGG CTTTTAACTG AAACCGGGAA GATGTCAAAA
TCTAAGGGGA ATGTTGTTGA TCCCAATAAA CTTATAGATG ATTTCGGGGT AGACCCGATA
AGGTATTATC TGTTACGTGA AGTTGCTTTT GGCCAGGACG GGACATACTC AACTGAGGCT
TTAATTAAGA GAATTAATTC TGATCTGGCC AATGACCTCG GGAATCTTCT GCACCGGACT
GTTACTATGG TTGATAAGTA CTTTGACGGG GTAATACCTG AACCAGGTGT TGAGAAAGAG
GTGGATAAAG ACCTTAAGAA TTATGCCCTG AAAACCCTGG ATGAAATTGA TAACAGTATG
GACAACCTCA AATATGCAGT AGCTCTGGAG TCATTATGGA ATTTTATCAG GAGAAGTAAT
AAGTATATAG ACCAGACAAC CCCGTGGATT CTGGCCCGGG ATGAGGATAA AAAAGACCGG
TTGGGGACTG TTCTGTATAA TTTAATTGAG GCCCTGAGAA TTATTGCCGG TATGCTGAAA
CCATTTCTGG TGGAAACACC ATACATGATT GGTGAACAGA TTAATGCCAG GGATTTAATA
GAGAAAGCAT CATGGAGTGA TTTAAAACAA TGGGGTCTAC TATCTCCGGG AAGAAAAGTA
AAAAAGGGTA AACCGATTTA TCCCAGGATT GATATAGAAG AATATTTTGA AAGACTGAAC
AACAATGAAA ATAAGGAAAC CAGTGATAAT AAAGGAAAAG GAGGTAATGA TATGGCAGAA
CAGGATAAAA ATACAGGAAC TATTTCGTTT AATGATTTTA CTAAACTTGA TTTAAGGGTA
GCTGAGGTCA AGGAAGCAGA AAAAATAGAG GGGAGTAATA AGCTCTTAAA GCTAAAAGTG
TCTCTGGGAG ACGAGGAAAG ACAGGTGGTT GCCGGTATAG CCAAACACTA TAATCCTGAG
GAACTTGTTG GTAAAAAAGT AATCCTGGTG GCTAATCTTG AACCGGCTAC TATTTTTGGG
GTAAAATCAG AAGGTATGGT GCTGGCTGCC TCCAATGACA GTGGTGAATT AACTCTGACT
ACAGTTGAGA AGGATATATC CAGTGGTAGT CAGGTAAAAT AG
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| Protein sequence | MSEKTFYVTT PIYYPSDRLH IGHAYTTVAA DTLAKFKEMQ DYDTMFLTGS DEHGQKIERK
ASEAGKKPGE YVDEIVATFK DLWKRLGVDY DYFIRTTNPD HEKVVQEIFK KIYEKGDIYK
GKYEGWYCTP CETFWTERQL EGEKVCPDCG RPVEWVEEES YFFKLSKYAD RLLEHIKKHP
EFIQPESRRK EMINFIESGL EDLSVSRTTF DWGIPVPIDD DHVIYVWFDA LSNYISAIGY
LSDDKKFNHY WPADVHIVGK DILRFHTIIW PIILMALDLP LPKKVFGHGW LLTETGKMSK
SKGNVVDPNK LIDDFGVDPI RYYLLREVAF GQDGTYSTEA LIKRINSDLA NDLGNLLHRT
VTMVDKYFDG VIPEPGVEKE VDKDLKNYAL KTLDEIDNSM DNLKYAVALE SLWNFIRRSN
KYIDQTTPWI LARDEDKKDR LGTVLYNLIE ALRIIAGMLK PFLVETPYMI GEQINARDLI
EKASWSDLKQ WGLLSPGRKV KKGKPIYPRI DIEEYFERLN NNENKETSDN KGKGGNDMAE
QDKNTGTISF NDFTKLDLRV AEVKEAEKIE GSNKLLKLKV SLGDEERQVV AGIAKHYNPE
ELVGKKVILV ANLEPATIFG VKSEGMVLAA SNDSGELTLT TVEKDISSGS QVK
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