Gene Hore_20240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20240 
Symbol 
ID7314348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2184448 
End bp2184927 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content37% 
IMG OID643612468 
Productconserved hypothetical protein TIGR00246 
Protein accessionYP_002509764 
Protein GI220932856 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA ATATTATGGC GGTAGGAAAA ATAAAGGAGG ACTACATTAA TGCTGGAATA 
AAAGAATTTT TAAAAAGACT AAAGCCCTAT ACCGAAGTAA ATGTAATCGA GGTAGATGAT
GAAAGAATCC CTCCCAATGC CAGTGGAGCC CAGATAGAAA AAGTCAAAGA AAAAGAAGGG
GAGAGGCTAT TAAAGAATGT CCCCAAAAAC TCCTATGTTA TCGTACTGGA TGTTAAAGGG
AAGCCAATGA CTTCAGAGGG ACTGGCTAAA TCTATTCAAA ATCTGCAATT GCAAGGTTAC
AGTAATATAA CTTTTATTAT TGGAGGGGCC CTGGGGTTAA GCCAGAAGGT CCTGGATACC
GGAGATTATA TTTTATCATT TTCCCATATG ACTTTTACCC ACCAGATGAT AAGGCTGATA
TTGCTGGAGC AGTTATATCG TGCTTTTAAA ATAATTAAAG GTGAACCGTA TCATAAATAA
 
Protein sequence
MKINIMAVGK IKEDYINAGI KEFLKRLKPY TEVNVIEVDD ERIPPNASGA QIEKVKEKEG 
ERLLKNVPKN SYVIVLDVKG KPMTSEGLAK SIQNLQLQGY SNITFIIGGA LGLSQKVLDT
GDYILSFSHM TFTHQMIRLI LLEQLYRAFK IIKGEPYHK