Gene Hore_20020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20020 
Symbol 
ID7312817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2158638 
End bp2159114 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content37% 
IMG OID643612448 
Producthypothetical protein 
Protein accessionYP_002509744 
Protein GI220932836 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0000359869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAAGA AATTAAACAT CCTCATGTTC AGCTGTGAAT ATGATAAGGC CCTGGCTGCC 
TTTATTCTTG CCGATTCTGC CAGGGCTATA GATATGGAAG TATCTATGTT TTTTGCCTTC
TGGGGCCTCT TTTTATTAAG AACACCCGAT AAACTGGACT ATAAAGACAA AACAAACTTA
GAAAAAATGT TTGGGGCAGT AACCCCGAAG GGACCAGATG AATTACCTTT ATCCCGGATG
AACTTTAGTG GTTTTGGTAA ATTTATGCTG AAAAAAATGA TGAAAGATGA CGACGCTCCA
ACCCTTAAAG GTCTTCTTGA AGAAGCACAT AAAAAAGGGG TCAATTTTTA CTGCTGTAAG
CTTTCCAGTG AAGTTATGGG GATAAAAAAA GACGAGTTGC CATACAAAAC CAAAATAATG
ACAGCAGAGG ATTATTTGAA TGATGCTCTC AATTCAGATA TTCAACTTTT TATATGA
 
Protein sequence
MTKKLNILMF SCEYDKALAA FILADSARAI DMEVSMFFAF WGLFLLRTPD KLDYKDKTNL 
EKMFGAVTPK GPDELPLSRM NFSGFGKFML KKMMKDDDAP TLKGLLEEAH KKGVNFYCCK
LSSEVMGIKK DELPYKTKIM TAEDYLNDAL NSDIQLFI