Gene Hore_19550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19550 
Symbol 
ID7312770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2097006 
End bp2099630 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content44% 
IMG OID643612401 
Productpullulanase, type I 
Protein accessionYP_002509697 
Protein GI220932789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02102] pullulanase, extracellular, Gram-positive
[TIGR02104] pullulanase, type I 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA AATTTGAGAA AAATACTGTT ACCCTTGAAG ATATAAGACC CAGGGTAAAA 
AAAGGAGCCA CTGAAATACC TGAAGGCCAT GTCAGGCTTC ATTACCGCCG TTTTGATGAA
AATTATGAGG GCTGGGGACT CCATCTCTGG GGTGAAGGTT ATGCCGGACC TCCAGTTACC
TGGGGAAGCC CTTTACCTAT AACCGGTATT GATGACTATG GTGCTTACTG GGATATTCCG
TATAATGAAG GTGTTGGAGA CCTCAACTTC ATTATACATA AAGGAAATAT AAAGGATCCG
CAGCCGGACA GGACATATCC TGATCCCGAT AAGAATAAAG AAATCTGGTG TGTTTCCGGT
GAAGTTAAAG AGTTCCTGAA TAAAGAAGAA GCCCTCAATG CTGCCGGTAA TAAAGTGGTC
AGTGCTGTTA TTAAGGACAG GAGAACCATT GAGGTCGAGT TCCGCTCAGA GATCAGTAAA
CCGATTTATA TCAGGGACGG TTATGATTAT GTTCCCCTTA AAAAGCTTGA TATGTCCCAG
GCTCCCGTTT ATGTCCTGAC TACCAGGGAA GACCTTGATT ATAATAAAAC CTATAAAATT
GAGTGCGGGG CCCTGGAAGG CAAGACTATT CTTGGACCTG AAGCCATTGA TAAGGCTTTT
GCCTATGACG GTGAACTGGG GGCCCTTTAT AAACCGGAGG CTACCACCTT TAAACTCTGG
GCACCCCTGG CAACTGAGGT TAAATTAAAA TTGTTTAAAG AGGGTAATGA TCAAAAGCCA
TATAAAATTG TGCCCATGAA CAAAGGAGAT AAAGGTGTCT GGAGTGTAAC GGTTGCAGGC
GATTTACTTG GTGAATTCTA CCAGTATAGT GTTACCAACA ACGGTCAGAC CCGGAATGCC
CTGGATCCCT ATGCTAGATC TATGGCCGGG TTTAACAGTA ATGGTCCTGA TAAGGTTGGT
AAGGGAGCCA TTGTTGACCT TGATCTGACT GATCCTGAAG GCTGGAATCA GGATGACTAT
GTCTCCATTG AAGACCAGGA AGATGTAGTT ATCTATGAAA TGTCAGTCCG TGATTTTACT
ATTTCCGTTG ATTCAGGAGT TGATTTTGAG AAAAAAGGTA CCTATTTAGG GTTTATTGAT
AAGATACCTC ACTTAAAGGA CCTGGGTATT ACCCATGTTC AGTTAATGCC GGTTTTAAAC
TTCTATTACG GTAATGAGTT CAATAAGGAT TTTGAAAATA TCGGTAGTGC CGGTGAGGCC
AATTATAACT GGGGTTATGA CCCTCATAAC TACTTTACAC CTGAAGGCTG GTATTCACTG
GATCCCTCAG ATCCACATCT GAGAATTAAG GAATTAAAAA CCCTCATTAA GGCTTTACAC
GATGCCGGTA TTGGGGTTGT CCTTGATGTA GTTTATAACC ATACCGCTAA AACCAGCACC
TTTGAAGATA TTGTCCCCAA CTATTATTAC AGGCGTAACC CCGATGGTTC CTTCACCAGT
GGTTCCGGTT GTGGTAATGA TACCGCTTCT GAACGGGCCA TGATGAGGAA ACTTATTGTG
GATTCAACCA GATACTGGGT TGAAGAATAT CATGTCGATG GTTTCCGGTT TGACCTGATG
GGATTACATG ATGAGACAAC CATGAAAAAG GTTGCCAGCA CCTTAAGGTC CATCAATCCT
GATGTGGTCC TCCATGGTGA GGGCTGGAAT ATGGGGACCC TCCCTGTTAA AGACCGTTAC
ATTAAGGGGG CCGGGGCTGA AAGAAGCTGC CTCCAGATGG AACATGCTAT TGCCGTCTTT
AATGATGGTT TAAGAGATGC CCTGAAACAT GAGTATTATG CCTCTCCGCT CCCCGAAGGT
GGGTTTGTTC AGAGGCAGAA GAACAAAGAA CCCCTTATCA GATCAGGAAT AATTGCCGGT
ATGGTTGATT ACACTTCACC GGTATTGATT GATGGTAATC CCTATAATCG TTTTGCTGAT
GACCCTGAAG AAACTATTAC CTATGTTACC TGCCATGATG GTTATACTCT CTGGGACAAA
ATTGTCGGGT CAACTCCCAA TGCTACCGAA GAAGAAAGGA AGCAGATGCA CAAACTGGCC
CATGCAGTAA TCCTGACTTC CCAGGGTAAA CCCTTTATTC ATGGTGGAGC CGAATTGTTA
AGGAGTAAAC CCGACCCCGA TAATGATAGG TATGGGGTCG ACCATAACAG TTATGATTCG
GGTGATTTGA CCAACCAGAT TGACTGGTCC CGTAAGGTTA AATATGCTGA TGTCTATGAA
TACTTTAAGG GGCTTATTGA ACTTAGAAAA TCACACGAGG CCTTTAGAAT GGAAACCATG
GAAGAAATCC AGAAGGGGTT AACCTTTATT GAAGAAGATA TTCCCTTCCT GGTTGCCTAT
CGTCTTGAAG AACAGGATGG AACTGATCCC TGGAAAGAGA TAGTGGTTAT TTACAATGCT
AATAAAGAAA ATAAAACGGT TGAGGTTGAC GGTGTTGACC CCAGCTGGAA GGTAGTAGTC
GATGGTGACA GGGCCGGAGT AGAACCCCTT GCTGAAACCG AAGTAGTTGT CAGGGATGGC
GAAGTAGTTG TACCCCCGAT TTCCTGTGTG GTTATTCATA AATAA
 
Protein sequence
MEGKFEKNTV TLEDIRPRVK KGATEIPEGH VRLHYRRFDE NYEGWGLHLW GEGYAGPPVT 
WGSPLPITGI DDYGAYWDIP YNEGVGDLNF IIHKGNIKDP QPDRTYPDPD KNKEIWCVSG
EVKEFLNKEE ALNAAGNKVV SAVIKDRRTI EVEFRSEISK PIYIRDGYDY VPLKKLDMSQ
APVYVLTTRE DLDYNKTYKI ECGALEGKTI LGPEAIDKAF AYDGELGALY KPEATTFKLW
APLATEVKLK LFKEGNDQKP YKIVPMNKGD KGVWSVTVAG DLLGEFYQYS VTNNGQTRNA
LDPYARSMAG FNSNGPDKVG KGAIVDLDLT DPEGWNQDDY VSIEDQEDVV IYEMSVRDFT
ISVDSGVDFE KKGTYLGFID KIPHLKDLGI THVQLMPVLN FYYGNEFNKD FENIGSAGEA
NYNWGYDPHN YFTPEGWYSL DPSDPHLRIK ELKTLIKALH DAGIGVVLDV VYNHTAKTST
FEDIVPNYYY RRNPDGSFTS GSGCGNDTAS ERAMMRKLIV DSTRYWVEEY HVDGFRFDLM
GLHDETTMKK VASTLRSINP DVVLHGEGWN MGTLPVKDRY IKGAGAERSC LQMEHAIAVF
NDGLRDALKH EYYASPLPEG GFVQRQKNKE PLIRSGIIAG MVDYTSPVLI DGNPYNRFAD
DPEETITYVT CHDGYTLWDK IVGSTPNATE EERKQMHKLA HAVILTSQGK PFIHGGAELL
RSKPDPDNDR YGVDHNSYDS GDLTNQIDWS RKVKYADVYE YFKGLIELRK SHEAFRMETM
EEIQKGLTFI EEDIPFLVAY RLEEQDGTDP WKEIVVIYNA NKENKTVEVD GVDPSWKVVV
DGDRAGVEPL AETEVVVRDG EVVVPPISCV VIHK