| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18890 |
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| Symbol | |
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| ID | 7312704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2017908 |
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| End bp | 2020247 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643612336 |
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| Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
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| Protein accession | YP_002509632 |
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| Protein GI | 220932724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase
[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I
[TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000185158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATAT TTTACTTAAT CTATAATCTG CTCTTAATAA CTGTACTCAT ATTATATCTA
CCTTTTTTGA TCTACAATTT TATAAAAGGT AAATACCGGG AGGGTTTTCT GGAGAGACTG
GCTCTCTATC AAAAGTCTTT TATAGAGATG GTTAAGCTAC ATCCTGTTAT CTGGATCCAT
GCTGCTTCAG TGGGGGAAAC TATGGCTGCA GAACCCCTTG TCAGAGAATT GAGGGAACAG
TATCCCCACG TTAAGCTTAT ATTTTCGACA GTTTCCAGTA CAGGAAGGCA GACTGCCCGT
AAATTTTATA AAAAAGAGGT TGATGCCATA ATATATTTTC CGATAGATTT AGGGTTTATT
ATTAAAAGGG CTATAAAACT GATTAATCCC CGTCTCGTTA TTATGATTGA AACCGAGTTA
TGGCCCAATT TTATACGTTA TGCTGATAAA TCTGGTTCAA GAATTATGGT CGCCAGTGGC
CGTATCAGTG ATAAAGGATA CAAAAATTTT AGATACCTGG GTCCCCTTTT AAGAGATATG
CTGAAAAGGG TAGATGTTTT CAGTATGCAG TCTGACCTTG ATGTTCAGCG AATAGTGGCT
CTGGGGGCTA AGGAAGACAG GGTATACCGG AATGGCAACA TTAAGTTTGA TAAAGAATAT
TCTGTTTCTC CCCTGGAGGT TAATAAACTA AGACAGGAGT TTAACCTTGA TGAAAACCAG
CCGGTGATGG TAGCTGGAAG TACCCATGCC GGTGAGGAAG AGAAGTTGAT AACTGTTTTT
GAAAGGGTTA ATAAAGAGCT TCCTGACTTT GTCATGATTA TTGCCCCCCG TTATATTGAG
AGGGTGGAAC AGGTAGAAAA GCTATTTACG AGTAAGGGAA TTAAAACAAT CAGGCGGAGT
GAACTGGAGG GTTATAAACG GCGGGAGCAG GTTATTCTGG TTGACACCTT CGGGGAACTG
GCCCTGATTT ATAAACTGGC TTCTCTGGTT TTTGTGGGTG GAAGTTTAAT CCCCAGGGGG
GGTCATAACA TTATTGAACC GGCTGCCCAG GGAAAGCTGG TTTTATTTGG TCCCCATATG
TTTAACTTTA AGGAAGAGAC TAAATTTCTC CTGGGACAGG AGGCTGCAGT ACAGGTAGGT
AATACCGACG GATTGGGAGA TAAGGTCCTA TATTATTTGA AAAATCAGGA CAGCCTCCGG
GAAAAAAGTG AGCGGGCCCG GCAGATAATT ACGGAAAACC GGGGAGCGAC AATCAGAAAT
TTAAAACTGG TATCGGAACT GTTACAGAAA AAGTCACGAC TCAACATGCT TATTATACGC
CTCAGTGCTA TCGGGGATGT TATTCATGCC CTGCCGGTAG CCTATGCTGT CAGGCAAAGC
TATCCTGAGG CTGAAATAAC CTGGATAGTT GAGGATAAAG CCAGTGATCT AGTCCTGGAC
AATCCTTATC TGGACCGGGT TATTATTATG CCCAGAAAGA AATGGAAAGA AGTTTTTAAA
GCTGATAAAT TAAAAGCCCT GGGGCAAGTA AGGTCTTTTG TTAAGGAGTT AAAAAAATAT
AATTTTGATA TGGCCCTTGA TGTTCATGGC CTTTTTAAAA GTGCTATAAC CGCTCTATGG
AGCGGGGCCA GAGTAAGGTA TGGACCTGGC GATGGACGGG AGGGGAGCAA ATTTTTTTAT
ACAGACAAAT TGACTCCCCC GTCTACTCGC GTTCATATGA TTGATAGAAA TCTGGAGCTG
GCCCGGGGAA TCGGCGCCAG GACCGGGGAA ATCAGGTATG GGATTGTCAC CGGTGAAAAA
GAAGTCACTA AAGTCGACAG GCTTTTAGGC CAATTTGATG GTAAGGGTAA GTTCATGGTA
TGTATCAATC CCTATACCAC CTGGAAATCA AAGAACTGGC TTGAGGAAAG GTATGCCCGA
CTGGCTGACC TCCTTATAAA GAGAAATGGT TGTATCGTTA TATTTACCGG TGGTCCCGGT
GATAAAGAAG GTATTGAAAG AATACAGGCC TTAATGGAAG AACAGGCCCT GAACCTGGCC
GGGCAGACAA ATTTAAAGGA ACTGGCAGAG CTTTATAAAC GGACTCACCT TTTTATCGGT
GGAGATACAG GCCCCATGCA TCTGGCAGCA GCGGTAGGTA GCAGGGTAGT GGCCCTGATG
GGGCCCACTG ATCCTGTAAC TCATGGTCCT TACGGAGATG GCCATATTGT AATCCAGCAC
CAGGACCTTG ATTGTATTAA ATGCTGGAAA CGGGAATGCC CGGCCAGTCA TAGTTGTATG
AAAAATATCA GGGTGGACGA AGTTCTGTCA GCAGCAGAAA GAATTCTGGG GGTGACCTGA
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| Protein sequence | MFIFYLIYNL LLITVLILYL PFLIYNFIKG KYREGFLERL ALYQKSFIEM VKLHPVIWIH
AASVGETMAA EPLVRELREQ YPHVKLIFST VSSTGRQTAR KFYKKEVDAI IYFPIDLGFI
IKRAIKLINP RLVIMIETEL WPNFIRYADK SGSRIMVASG RISDKGYKNF RYLGPLLRDM
LKRVDVFSMQ SDLDVQRIVA LGAKEDRVYR NGNIKFDKEY SVSPLEVNKL RQEFNLDENQ
PVMVAGSTHA GEEEKLITVF ERVNKELPDF VMIIAPRYIE RVEQVEKLFT SKGIKTIRRS
ELEGYKRREQ VILVDTFGEL ALIYKLASLV FVGGSLIPRG GHNIIEPAAQ GKLVLFGPHM
FNFKEETKFL LGQEAAVQVG NTDGLGDKVL YYLKNQDSLR EKSERARQII TENRGATIRN
LKLVSELLQK KSRLNMLIIR LSAIGDVIHA LPVAYAVRQS YPEAEITWIV EDKASDLVLD
NPYLDRVIIM PRKKWKEVFK ADKLKALGQV RSFVKELKKY NFDMALDVHG LFKSAITALW
SGARVRYGPG DGREGSKFFY TDKLTPPSTR VHMIDRNLEL ARGIGARTGE IRYGIVTGEK
EVTKVDRLLG QFDGKGKFMV CINPYTTWKS KNWLEERYAR LADLLIKRNG CIVIFTGGPG
DKEGIERIQA LMEEQALNLA GQTNLKELAE LYKRTHLFIG GDTGPMHLAA AVGSRVVALM
GPTDPVTHGP YGDGHIVIQH QDLDCIKCWK RECPASHSCM KNIRVDEVLS AAERILGVT
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