| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18700 |
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| Symbol | |
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| ID | 7312684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1997576 |
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| End bp | 1999120 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612317 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002509614 |
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| Protein GI | 220932706 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA CAAACATGGA TTACGAAAAT ATTAATAGTC TAGAGGTCAG TGAGATAAAT
AATTTTTATA TAGACAATAA GTTAATCAGA AATTTCCCTG GCTCAACTTT AAAAGAAAAC
AGGCTAATTC CCCTGACCAG ACATGGTGAC ACTGTAGTAG TTATTTCCGA TAATTACCCT
CCCCCTGAGG CAATCAATGA CCTGGAAGTA TATACAGGGT TTAAAATAGA TGTCAGGTTA
GAAAAATCTC ATGTGGTTCA ACAGCTTGTA AATGAACACC TTAAGGCTCC GGTGGATACA
GTAGAAGATA TGCTTGATGA TAATAATTTG CGGGGTCTGG ATGATTTCAA GATCCTAAAA
ATTGATAGCC GGGTTGAAAA CCTGGAGGAT TTAGCCCAGG AAGCCCCAAT AATCAGACTG
GTTAATGCCA TCATCACTAC TGCCTTGAAG AAGGGAGCAA GTGATATCCA TATTGAACCC
TTTGAAGACA AATTAAGGTT AAGGTACAGA ATAGACGGTG TTTTATATGA GAATCCTGCC
CCGCCACTGG AGTTGTTACC GGCTATCATT ACCAGGATAA AAATTATGTC TGAATTAAAT
ATTGCTGAAA GACGGCTTCC TCAGGAAGGT AGAATCAGAA TCAGGGTATC GGGTCGGGAG
CTTGATATAA GGGTGTCTAT TATTCCTGCT CTCCATGGGG AAGGAGTTGT CCTCAGGTTA
CTTGATAAAG CAGCCCGGTT ACTTGATATC AAAAACCTCG GCTTTAGCGA GGCTATGTTA
AAAAGGTATT TGAACCTTAT TAATATTCCT CATGGCATTA TTCTGGTGAC AGGTCCGACC
GGAAGTGGTA AGACAACAAC CCTTTATGCA ACCTTACAGT ATTTGAATTC ATCAAGTCGA
AAGATAATTA CCATTGAAGA CCCGGTTGAA TACCAGTTAG AGGGAATTAA CCAGATACAG
GTAAAACCGG AGATTAACTT CGATTTTGCC TCTGGTCTAC GATCTATTTT GCGACATGAT
CCCGATATTA TTATGATAGG TGAAATCAGA GATGTGGAAA CAGCTAAAAT TGCCATTCAG
GCAGCCCTGA CAGGCCATCT GGTCCTGGCA ACTCTCCATA CCAATGATGC TGCCGGTGCT
GTCTCGAGAT TACTTAATAT GGGGGTTGAA GATTACCTGC TGGCAGCAAC CCTGAAAGGG
ATACTGGCCC AACGTCTTGT CAGGGTTTTA TGCCCCAGGT GTAAGGAGTC CTATCAACCT
ACATCTTCAG AAGTTAACCT GATTGATGAT GATGTAGAGT TATTATACCG TCCGGCGGGT
TGTACCTTCT GTAATAATAT AGGTTTTAAG GGGCGGACGG GTATTTATGA ATTATTAACT
GTAACCCCCC AGATTGAATC AATGATTGTC CAGAGGGCCA GCTCAAGTGA GATTAAAGAA
GAGCTTAAAA AAACAGGTTA TACCAGTCTG TTCACCGACG GTTGTATCAA GGTAAAAGAC
GGTTTAACTT CCATAGATGA AGTGGTCAGG GTTACAACCC AGTAA
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| Protein sequence | MDKTNMDYEN INSLEVSEIN NFYIDNKLIR NFPGSTLKEN RLIPLTRHGD TVVVISDNYP
PPEAINDLEV YTGFKIDVRL EKSHVVQQLV NEHLKAPVDT VEDMLDDNNL RGLDDFKILK
IDSRVENLED LAQEAPIIRL VNAIITTALK KGASDIHIEP FEDKLRLRYR IDGVLYENPA
PPLELLPAII TRIKIMSELN IAERRLPQEG RIRIRVSGRE LDIRVSIIPA LHGEGVVLRL
LDKAARLLDI KNLGFSEAML KRYLNLINIP HGIILVTGPT GSGKTTTLYA TLQYLNSSSR
KIITIEDPVE YQLEGINQIQ VKPEINFDFA SGLRSILRHD PDIIMIGEIR DVETAKIAIQ
AALTGHLVLA TLHTNDAAGA VSRLLNMGVE DYLLAATLKG ILAQRLVRVL CPRCKESYQP
TSSEVNLIDD DVELLYRPAG CTFCNNIGFK GRTGIYELLT VTPQIESMIV QRASSSEIKE
ELKKTGYTSL FTDGCIKVKD GLTSIDEVVR VTTQ
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