Gene Hore_17940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17940 
Symbol 
ID7313792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1918743 
End bp1919315 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content46% 
IMG OID643612241 
Productpredicted membrane protein 
Protein accessionYP_002509538 
Protein GI220932630 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTTTTA TAGAAGTGGC AGCCCTGGCA GTAGCCCTGG GAACTGATGC CTTCTCGGTT 
GCTGTTGTGG TAGGAGTTCA GCAATTTAAA CCCTCAAAAA TAGTTGAGAT TAGCGCCATT 
ATTGGCCTTT TTCATATTAT TATGCCCCTG ACCGGGTATT ATGGTGGCCA TGCCATAGAA 
GAATTGGTAA CCAGGTATTT CTGGAGCTAT GGCCAGGTCG ATAAGTTTTT TAAAATCATC 
GGGGCAGGCC TTTTATTACT GATAGGTTTC TATATGATAG TTGAAAAGTG GCTGGGGAGG 
GAACAGGAAC TCAAGAATTT TGATTTAACC GGTTGGGGGA TTATTGCCCT GGCCATAAGT 
GTCAGTATGG ATGCCCTTTC GGTTGGTATT AGCCTGGGGA TGCTGGATGT TGGCATTTTT 
GCAGTTGTTT TGTTTGGAGG TGTAGCCACG GTTATGATGG CCTCCGGCTT ATCCCTGGGT 
TCTAAAGTGG GTTCCTGGAT TGGGGATGAT ACCCAGGTTA TCGGGGGACT GGCTTTAATT 
TATCTGGGCC TCCATTTTAT GGGGTTAGTC TAG
 
Protein sequence
MGFIEVAALA VALGTDAFSV AVVVGVQQFK PSKIVEISAI IGLFHIIMPL TGYYGGHAIE 
ELVTRYFWSY GQVDKFFKII GAGLLLLIGF YMIVEKWLGR EQELKNFDLT GWGIIALAIS 
VSMDALSVGI SLGMLDVGIF AVVLFGGVAT VMMASGLSLG SKVGSWIGDD TQVIGGLALI 
YLGLHFMGLV