Gene Hore_17930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17930 
Symbol 
ID7313791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1917743 
End bp1918711 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID643612240 
Productribose-5-phosphate isomerase 
Protein accessionYP_002509537 
Protein GI220932629 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase
[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAT TACTCTTTGT CTGTACAGGG AATACCTGCC GTAGTCCCAT GGCCAGGTTT 
CTGCTGGAGA AGATGTTATC TCAAAATAAA GATTTAAACA AAAAATGGGA AATAGATTCA
GCCGGTATTG CGGCCTTTCC CGGTGGTAAA GCCAGTGATA ATGCTGTCAG GGTTCTGGGC
GAAGAAGGAA TAGACCTGAC AGGTCATCTT TCTAAACAGG TAGATGGTGA CTTAATTAAA
GATGTCGATA TTATTTTAAC TATGACGATT AATCATAAAG ATATGCTCCT TGATAACTTT
CCTGAAGCTA AAGGCAAGGT CTATACCCTT AAGGAATTTG CCGGTCAGGC TGAAAATCCC
GATGTTTCAG ATCCTTTCGG GCAGTCCCTG GAGATATACC GCCAGACCCG GGATGAAATA
AAGAAGTATC TTCAAAAAAT AATGGGAAAA TTGAATTATT ATAATAGTGA AGAAGGAATA
GAAGGGATGG TCGAGAATAA TATTAAAAGA GGTGATATAG ATATGAAAAT AGCTATTGGA
TCAGATCATG CCGGCTATGA AATGAAACAG GAGATTATTA AACTACTGGA CGAGCTGGGA
TATGATGTAT CAGATATGGG TACTGATTCC GATGAATCTG TAGACTATCC TGATTTTGCC
TATAAAGTAG CATCAGGGGT TGCCTCCGGG GAGTATGACC GGGGACTTCT GGTGTGTGGT
ACCGGAATTG GCATGTCTAT TGCTGCCAAT AAGGTTGAGG GAGTCAGGGC TGCCCTCTGC
CATGATGTTT TTTCTGCCCG GGCTGCCAGA AATCATAATA ATGCCAATGT CCTGGCCCTG
GGTTCTAGGG TTATAGGGAT AGGTCTGGCT AAAGAGATAG TCAAAACCTG GCTGGAAGCT
GGTTTTGATG GAGACAGGCA TGAAAGAAGG GTTAATAAAA TTACCAGGAT TGAAAGGGGA
GAATACTAA
 
Protein sequence
MPKLLFVCTG NTCRSPMARF LLEKMLSQNK DLNKKWEIDS AGIAAFPGGK ASDNAVRVLG 
EEGIDLTGHL SKQVDGDLIK DVDIILTMTI NHKDMLLDNF PEAKGKVYTL KEFAGQAENP
DVSDPFGQSL EIYRQTRDEI KKYLQKIMGK LNYYNSEEGI EGMVENNIKR GDIDMKIAIG
SDHAGYEMKQ EIIKLLDELG YDVSDMGTDS DESVDYPDFA YKVASGVASG EYDRGLLVCG
TGIGMSIAAN KVEGVRAALC HDVFSARAAR NHNNANVLAL GSRVIGIGLA KEIVKTWLEA
GFDGDRHERR VNKITRIERG EY