Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_17930 |
Symbol | |
ID | 7313791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1917743 |
End bp | 1918711 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643612240 |
Product | ribose-5-phosphate isomerase |
Protein accession | YP_002509537 |
Protein GI | 220932629 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAT TACTCTTTGT CTGTACAGGG AATACCTGCC GTAGTCCCAT GGCCAGGTTT CTGCTGGAGA AGATGTTATC TCAAAATAAA GATTTAAACA AAAAATGGGA AATAGATTCA GCCGGTATTG CGGCCTTTCC CGGTGGTAAA GCCAGTGATA ATGCTGTCAG GGTTCTGGGC GAAGAAGGAA TAGACCTGAC AGGTCATCTT TCTAAACAGG TAGATGGTGA CTTAATTAAA GATGTCGATA TTATTTTAAC TATGACGATT AATCATAAAG ATATGCTCCT TGATAACTTT CCTGAAGCTA AAGGCAAGGT CTATACCCTT AAGGAATTTG CCGGTCAGGC TGAAAATCCC GATGTTTCAG ATCCTTTCGG GCAGTCCCTG GAGATATACC GCCAGACCCG GGATGAAATA AAGAAGTATC TTCAAAAAAT AATGGGAAAA TTGAATTATT ATAATAGTGA AGAAGGAATA GAAGGGATGG TCGAGAATAA TATTAAAAGA GGTGATATAG ATATGAAAAT AGCTATTGGA TCAGATCATG CCGGCTATGA AATGAAACAG GAGATTATTA AACTACTGGA CGAGCTGGGA TATGATGTAT CAGATATGGG TACTGATTCC GATGAATCTG TAGACTATCC TGATTTTGCC TATAAAGTAG CATCAGGGGT TGCCTCCGGG GAGTATGACC GGGGACTTCT GGTGTGTGGT ACCGGAATTG GCATGTCTAT TGCTGCCAAT AAGGTTGAGG GAGTCAGGGC TGCCCTCTGC CATGATGTTT TTTCTGCCCG GGCTGCCAGA AATCATAATA ATGCCAATGT CCTGGCCCTG GGTTCTAGGG TTATAGGGAT AGGTCTGGCT AAAGAGATAG TCAAAACCTG GCTGGAAGCT GGTTTTGATG GAGACAGGCA TGAAAGAAGG GTTAATAAAA TTACCAGGAT TGAAAGGGGA GAATACTAA
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Protein sequence | MPKLLFVCTG NTCRSPMARF LLEKMLSQNK DLNKKWEIDS AGIAAFPGGK ASDNAVRVLG EEGIDLTGHL SKQVDGDLIK DVDIILTMTI NHKDMLLDNF PEAKGKVYTL KEFAGQAENP DVSDPFGQSL EIYRQTRDEI KKYLQKIMGK LNYYNSEEGI EGMVENNIKR GDIDMKIAIG SDHAGYEMKQ EIIKLLDELG YDVSDMGTDS DESVDYPDFA YKVASGVASG EYDRGLLVCG TGIGMSIAAN KVEGVRAALC HDVFSARAAR NHNNANVLAL GSRVIGIGLA KEIVKTWLEA GFDGDRHERR VNKITRIERG EY
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