Gene Hore_17800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17800 
Symbol 
ID7313702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1907635 
End bp1909098 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content46% 
IMG OID643612227 
ProductATP synthase F1, beta subunit 
Protein accessionYP_002509524 
Protein GI220932616 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAG CAAAAAATGT AGGTCGGGTC GTTCAGGTTA TAGGCCCGGT AGTAGATGTT 
GAATTTCCCG GTGGACATTT ACCTGAAATA TATAATGCTA TCGAAATTGT CGGTGATAAT
AGAAAAATAA GTCAGGAAGG TCCCCATAAT GAGGATAATG AACCCGGTGA ACCGATTCGT
TTAATGGCCG AGGTTATGCA TCAGCTCGGT GATAACAGGG TTCGTTGTGT TGCCATGTCC
TCAACCGATG GACTTGTCAG GGGCATGGAA GCCCGGGACC TTGGTGAGCC AATCACTGTT
CCCGTTGGTG AAGAGGTCCT GGGTAGACTA TTTAATGTCC TCGGTGAGCC TATTGATAAA
CAGGGACCTG TTGATACTGA AGAAAAACTT CCCATTCATC GCCCGGCTCC GAGTTATGAA
GAGCAGGAAA CAACTACTGA GGTATTTGAA ACTGGCATCA AGGTTATTGA CTTACTAGCC
CCCTATGCTA AAGGTGGAAA AGTTGGTCTC TTTGGTGGGG CAGGAGTTGG TAAAACTGTC
TTGATACAGG AATTAATACA CAATATAGCT ATTGAACACG GGGGTTATTC AGTTTTTTCT
GGTGTTGGAG AACGTACCAG GGAAGGTAAT GACCTCTGGC TGGAGTTCCA GGAGGCCGAC
ATTCTTGATA AAGTAGCCCT TGTGTTTGGA CAGATGAATG AACCACCTGG AGCCAGGATG
AGGGTAGGAC TTACCGGATT AACTATGGCT GAGTATTTCA GAGATAAGGA AGGGCAGGAT
GTTCTCCTGT TTATAGATAA CATTTTCCGT TTTATCCAGG CCGGTTCTGA GGTATCAGCC
CTGCTCGGTA GAATGCCTTC TGCTGTTGGT TACCAGCCTA CCCTGGCTGT AGATGTAGGC
CAGCTTCAGG AAAGGATTAC TTCGACCAAA AAGGGTTCTA TTACCTCTGT TCAGGCAATC
TATGTGCCGG CTGATGACCT GACAGACCCG GCACCAGCAA CTACCTTTGC CCACCTTGAT
GCAACAACAG TTTTATCAAG GCAGATTGCT GAAAAGGGTA TATACCCTGC AGTTGACCCC
CTCGATTCGA CTTCGAGGAT ACTTGAACCC GGGGTCATAG GTGAGGAACA CTATAAGGTT
GCCCGCCAGG TCCAGGAGGT ATTACAGCAA TATAAGGACC TGCAGGACAT TATCGCCATC
CTGGGGATGG ATGAACTGTC AGATGAGGAT AAGATTATTG TTAACAGGGC CCGCCGGATA
GAAAGGTTCT TATCCCAGCC ATTCTTTGTA GCCGAACAGT TTACCAATAC CCCAGGCAAA
TATGTTCCGA TCAAGGAAAC CATCAGAGGT TTTAAAGAAA TTTTAGAAGG TAAACATGAT
GACCTGCCTG AAGAAGCTTT CTACATGGTG GGAACCATAG ATGAAGCGGT AGAAAAAGCC
AAACGGATTA AGGAAGGTGA GTAG
 
Protein sequence
MSEAKNVGRV VQVIGPVVDV EFPGGHLPEI YNAIEIVGDN RKISQEGPHN EDNEPGEPIR 
LMAEVMHQLG DNRVRCVAMS STDGLVRGME ARDLGEPITV PVGEEVLGRL FNVLGEPIDK
QGPVDTEEKL PIHRPAPSYE EQETTTEVFE TGIKVIDLLA PYAKGGKVGL FGGAGVGKTV
LIQELIHNIA IEHGGYSVFS GVGERTREGN DLWLEFQEAD ILDKVALVFG QMNEPPGARM
RVGLTGLTMA EYFRDKEGQD VLLFIDNIFR FIQAGSEVSA LLGRMPSAVG YQPTLAVDVG
QLQERITSTK KGSITSVQAI YVPADDLTDP APATTFAHLD ATTVLSRQIA EKGIYPAVDP
LDSTSRILEP GVIGEEHYKV ARQVQEVLQQ YKDLQDIIAI LGMDELSDED KIIVNRARRI
ERFLSQPFFV AEQFTNTPGK YVPIKETIRG FKEILEGKHD DLPEEAFYMV GTIDEAVEKA
KRIKEGE