Gene Hore_17760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17760 
Symbol 
ID7313698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1903791 
End bp1904750 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content42% 
IMG OID643612223 
Productsporulation stage II protein D 
Protein accessionYP_002509520 
Protein GI220932612 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain
[TIGR02870] stage II sporulation protein D 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.377102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATAT TATCCCTGAT GTTTATTGCT ATTGTTCTGA TAGTTTTTTC TATTGTCCTT 
TTAAGAGGAT TACGGGAAGA AGAACCCCTG GTTATTAAGG TGTTATTACA TCGGGAAGAC
AGGATAGTTA AAATGGGAAT GTCTGAATAC CTCCAGGGGG TTTTAGCGGC AGAGATGCCG
GCCTCATACC ACCTTGAGGC CCTTAAGGCT CAGGCAGTGG CCGCCAGGAC ATATACTTTA
AAAAGGATAA CTAAATTTGG TGGAAAACAG AGCCCGGAAC ACCCCGGGGC TGACATCTGC
ACTGATTACA GACATTGTCA GGCCTGGATT TCCCGGAACC AGATGAAGGG TAAGTGGGGA
ATTATCCCCT ATCTGTACTT TAAGAACAGG ATTAAGAGGG CGGTAGAGGA AACCCGGGGT
GAGGTTTTAT TATATGATGG CCGGTTTATT GATGCCGTTT ACCACAGTAA TAGTGGGGGA
CAGACTGAAG ATGCCCGACA CGTCTGGGGG AAAGCCACCC CTTATTTAAT TAGTGTTCCC
AGCCCATATG ATCAGGAGTC ACAACGGAAT TACCTTAATG ATTATGTAAT GGGACTGGAT
AGGTTTAATA ACTATCTGGG GACAGATATA GAGCCATCTA GCGGGAGTCA AAATATAAGA
GATAAAGTTA AAGTATTGAG TACCACACTG GGTGACCGGG TTTTAAAGAT TAAAATAGGT
AATAAAATAT TTACCGGTCG AGAAGTCAGG ACCAGGTTAA ACCTCCCTTC CAGTAAGTTT
ACCTTAAGGT TTATAGATGA AAAGGTTTTG ATAAAAGTTT TTGGTAAAGG CCATGGGGTT
GGTATGAGTC AGGATGGGGC CAATGGTTTT GCCAGACATG GTTATAATTA CCGCAAAATA
CTACAACATT ATTATCCCGG GACAAAAATT GTAAAATTAA AGGAACTTTT AAAAAAGTAG
 
Protein sequence
MYILSLMFIA IVLIVFSIVL LRGLREEEPL VIKVLLHRED RIVKMGMSEY LQGVLAAEMP 
ASYHLEALKA QAVAARTYTL KRITKFGGKQ SPEHPGADIC TDYRHCQAWI SRNQMKGKWG
IIPYLYFKNR IKRAVEETRG EVLLYDGRFI DAVYHSNSGG QTEDARHVWG KATPYLISVP
SPYDQESQRN YLNDYVMGLD RFNNYLGTDI EPSSGSQNIR DKVKVLSTTL GDRVLKIKIG
NKIFTGREVR TRLNLPSSKF TLRFIDEKVL IKVFGKGHGV GMSQDGANGF ARHGYNYRKI
LQHYYPGTKI VKLKELLKK