Gene Hore_17570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17570 
Symbol 
ID7313679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1877783 
End bp1878649 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content41% 
IMG OID643612204 
ProductUDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 
Protein accessionYP_002509501 
Protein GI220932593 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000323759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTG ATGGTAATTT ACAGCAAACT ATAGAAAAAC CTGTTAAGGC TTCAGGAACG 
GCACTCCACA CCGGTAAAGA AGTTAATGTC AGGTTTCTTC CGGCCGGTGA AGATACGGGA
GTAGTCTTCA AAAGAGTTGA TTTGCCAGAT AACCCGGAGA TCAAGGCTGA GCCATGGCAG
GTTGTATCAA CCAGGAGATG TACCAGTATT GGCCTTTCTA AAGATAGTGA TTCTCCTAAG
GTTCATACAA TTGAGCATTT AATGGCCGCC CTGTGGGCCC TGGAAATAGA TAATGTTATT
GTTGAAATTG ATGCGCCAGA AACACCTGTT ATGGATGGGA GTGCCCTTCC CTATCTGAAA
TTGCTTAAAA AAGCAGGTAT CAGAGAATTG AGTTCACCCA GAAAAATATG GGTGATTGAT
GAGCCTGTCT GGGTAAAAAG GGGTCATATG TATATGGTCA TTTTACCCTA TGATGGGTTT
AAAATAAGTT ATACCCTTGA TTATGACCAC AAGGTTATTG GGACCCAGTT TTTTGAGTTT
GATAAAGGTG AAAATTCCTT TGAAGAGGAG ATTGCTCCGG CCAGGACATT TGGTTTTGAA
AGGGAAGTAG AGGCTCTACA TAGAAGGGGC CTGGCTTTAG GTGGCAGTCT TGAGAATGCT
GTCCTCATCG GAGATGAGGA TACTGTAAAT CCTTTAAGGT TTTCTAATGA ATTTGTCAGG
CATAAGATTC TGGATGTAAT AGGTGATATG GCTTTAAATG GATTTGTTTC GGGACATATA
ATAACCGTCA GGTCAGGCCA TTCCTTACAC GTTGAATTAG CTCAGGAGAT TAATAAAAAA
CTTATACAGG AGAGTGAACG AGTATGA
 
Protein sequence
MFIDGNLQQT IEKPVKASGT ALHTGKEVNV RFLPAGEDTG VVFKRVDLPD NPEIKAEPWQ 
VVSTRRCTSI GLSKDSDSPK VHTIEHLMAA LWALEIDNVI VEIDAPETPV MDGSALPYLK
LLKKAGIREL SSPRKIWVID EPVWVKRGHM YMVILPYDGF KISYTLDYDH KVIGTQFFEF
DKGENSFEEE IAPARTFGFE REVEALHRRG LALGGSLENA VLIGDEDTVN PLRFSNEFVR
HKILDVIGDM ALNGFVSGHI ITVRSGHSLH VELAQEINKK LIQESERV