| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_17540 |
|---|
| Symbol | |
|---|
| ID | 7313676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1875695 |
|---|
| End bp | 1876513 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612201 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002509498 |
|---|
| Protein GI | 220932590 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3494] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000813715 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA TAGGTTTAAT TGCCGGCAGG GGTAAATTGC CTGCCATCTG GGCTGCAAGT
GCGCGGGACC GGGGACATGA TGTTTATGCC TTCCCCATTA TCGAAGAGGC TGATGAAGGT
TTGAAAAATA TAGCTAAGGT TATAAAACCG GTTAATGTCG GTGCATTTGA TAACCTTATT
AATATTTTAA TAGAGAATGA TATAAGTAAA GTGGTAATGA TCGGGAAGGT TAATAAGACC
AGGCTTTTTG GTAAAACCCG GTTGGATGCA AGAATGCAAC AGATGCTGGC AAACCTCAGG
GAATTGAATG ATGATAGCAT TCTTTTAGGA ATAGTTAATG AACTAAAAAA GGAAGGGATA
GAGGTCTTAA AACAGTCCAC TTTTATAGAA GACTTGTTCC CAACTCCGGG ACCGGTAACC
TCTAAAACCC CGGATGATTC CCTTCTGGAA GATATGAAAT ATGCTTTCAA ACTGGCCCGT
GGTATTGGAG GGCTTGATAT CGGGCAGACT GTCCTCGTCA AAAATAGAGC GGTTCTGGCT
GTTGAGGCTA TTGAAGGAAC CGATCAGGCT ATAAAACGGG CCGGGGAGCT GGGTGGAGCC
GGGGCTACCA TGGCCAAGGT GAGCAAGCCC AATCAGGATT TCAGGTTTGA TATTCCGACG
GTGGGATTAA CCACCCTCAG GAATCTTATA AAAATTAAGG CCCGGGGTTT AGTTATTGAG
GCCGGTAAAA CATTTATTGT CGACAGGGAA GAATTTATTG AAACGGCGGA GGCCAGTGGA
ATTACCGTTA TGGCTTTAGA GTCTGCCTCC CCTGAATAA
|
|---|
| Protein sequence | MSKIGLIAGR GKLPAIWAAS ARDRGHDVYA FPIIEEADEG LKNIAKVIKP VNVGAFDNLI
NILIENDISK VVMIGKVNKT RLFGKTRLDA RMQQMLANLR ELNDDSILLG IVNELKKEGI
EVLKQSTFIE DLFPTPGPVT SKTPDDSLLE DMKYAFKLAR GIGGLDIGQT VLVKNRAVLA
VEAIEGTDQA IKRAGELGGA GATMAKVSKP NQDFRFDIPT VGLTTLRNLI KIKARGLVIE
AGKTFIVDRE EFIETAEASG ITVMALESAS PE
|
|---|
| |