| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_17530 |
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| Symbol | |
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| ID | 7313675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1874540 |
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| End bp | 1875679 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643612200 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002509497 |
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| Protein GI | 220932589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00012447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCAAAA TAATGGTAGT AGCCGGAGAA GTCTCTGGTG ATATGCATGC AGCCAGGGTG
GTCCGGGAAA TTAAAAAATT AGCCCCTGAA ACCCGGTTTT TTGGTATGGG GTCAAAATGC
CTCCGGGAAG CAGGGGTTGA GGTTCTTGTT GATCCGACCG ATATAAGCAC CATCGGTTTT
AGTGAGGCTC TGAAGAACTA CAGACAGCAC CGGGATCATT TGAAAATGAT GAAAAAGGCC
CTGGAGCGGG AAAAACCTGA TGTAGCTTTA CTGGTGGATT ATTCAGGTTT TAATATAAAG
ATGGCCCGGA TTACCAAACG AAAAAAAATC CCCACTGTCA GTTATTTTAG TCCTTCGGCA
TGGGTCTGGG GGAAACGTCG GGCCCGGAAA ATGGCGAGGG CCCGGGCGGT TATTGCGTCA
GTCTTTCCTA TGGAAGAAAA AGTATACCGG GAAGCCGGGG CTGAGGTTCA TTTTGTTGGA
CATCCCCTGT TAGATATGGT TAATGTCGAG GAGTCTAAAG ATGAAATATG TAGAAAACTG
GAGCTTGATG GGGAAAAACC CATTATCGGG TTAATGCCGG GAAGCCGGAA ACAGGAAGTG
GAATACCTTC TCCCTGAGAT GTTGAAGGCA GCAGAACGGT TAAAGAAGGA AAAGGGTGAT
TTTCAATTTG TTATTCCCGT AGCTCCAGGG ATTGACCGGG ATAAAATTGT TGAAATGGCC
TCCCGGTATA AATTGGTACT CAAGGTGGTT GAAGGGGCCA ATTATGAGGT AATGAAGGCT
TCTGATTTCC TGGTGGTTGC TTCAGGTACT GCTACCCTTG AAGCGACAAT AATCGGAACC
CCTATGGTCA TCGTTTACCG GACGAGCTGG TCTACCTATC ACCTAGGAAA ATTACTGGTT
AACCTTGACT ACATAGGCCT CCCCAATATT ATTGCTGACC GGGAGATTGT ACCGGAATTG
CTCCAGCAGG ATGTTACCGC TGACAATATT TATCGGGAAA TTACAAATTT CATGAGTAAA
CCCTATCTTA TTAAAAGCAT AAAAAGGGAC CTGGAATATG TCAAAAATAA ACTGGGAAGG
CCTGGTGCCG TGAGGAGAAC TGCAGAACTT GTTTTGAAAA AGGGCAAATT GTATATTTAG
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| Protein sequence | MGKIMVVAGE VSGDMHAARV VREIKKLAPE TRFFGMGSKC LREAGVEVLV DPTDISTIGF
SEALKNYRQH RDHLKMMKKA LEREKPDVAL LVDYSGFNIK MARITKRKKI PTVSYFSPSA
WVWGKRRARK MARARAVIAS VFPMEEKVYR EAGAEVHFVG HPLLDMVNVE ESKDEICRKL
ELDGEKPIIG LMPGSRKQEV EYLLPEMLKA AERLKKEKGD FQFVIPVAPG IDRDKIVEMA
SRYKLVLKVV EGANYEVMKA SDFLVVASGT ATLEATIIGT PMVIVYRTSW STYHLGKLLV
NLDYIGLPNI IADREIVPEL LQQDVTADNI YREITNFMSK PYLIKSIKRD LEYVKNKLGR
PGAVRRTAEL VLKKGKLYI
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