Gene Hore_17180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17180 
Symbol 
ID7313640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1833676 
End bp1834704 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content36% 
IMG OID643612165 
Productconserved hypothetical protein TIGR00374 
Protein accessionYP_002509462 
Protein GI220932554 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA GTAGAAGGAC CATAAAAAGG GGTATAATTC TATCAGTAAG TGTCAGTATT 
GTAGCCCTGA TACTGGTAAT GGTATTAACC CAGAATGAAC TTACTTTTAA ATCCTTTAGT
AGAGTAAACA CTGTTTATCT GGTAATAGCT ACCTTAATAA TGCTGACCTT CTGGATTTTA
AAGGCGTTAA AACTCAAGGT TTTAACCCAT GTGCTTGGGG GAAAGGTTTC AACTTATAAA
GTCTTTACCA TTTACCTGGC CAGTGCTTTT GTGTCTCATG TTACCCCTTC TACTTCAGGT
GGGCTGCCAT TTCAGATATA TTTTTTACAC CGTGAGGGTT TACCCCTGGG GAAAACTACA
GCCCTGACTG TCCTTGATGG AATAATAACT TTTTTATTTT TTATAATAGC AACCCCCTTT
TTACTGCTCC TCTGGGGTGA ATATTTAAAT CTTGGACCTA AAATTGCAGG TCTTTTTCAT
ATTGCCATGT GGCTTGTTAT TTTATTTATT GTCATCAGCT TTATTCTCAT TTTTAATGCC
AGTAAGGCCA AGGTTTTTGT CAACTGGCTG GTTAATCTCA GGTGGGTTAA AAAATATTTT
AAAGATGAAA CCCTACTTAA ATTTAAAAAC TTTATTGAAA AAGAAGTAGA TTATTTTAAT
GAAGGAATAA AGATATTATT TAAGAATAAA CGGGATATGT TTCTGGTCAT TTTCTATACC
ATATTATACT GGTTTTTTTA TTTGAGCCTG GCCCCTGTTT TGCTACTGGG ACTCGGTATC
AAGATAGCAA TCCCACCCAT TATTCTGGCC CAGCTAGTCT TTAATTTTAT TCAACCCGTA
ATCCCGACTC CAGGGGGAAG TGGGGGAGCT GAACTCGGCT TTGCTTATTT ATTTAAGTTT
ATGGTCCCCA ATTATTTACT CGGTATATTT GTGGCTATCT GGAGGTTTTT TATGTTTTAC
TCCAGTTTAA TAGTGGGTGG TTTATATTTT ATTAAACTGG TTAGGGGGAC GGACTACCTG
GAAAAATAG
 
Protein sequence
MELSRRTIKR GIILSVSVSI VALILVMVLT QNELTFKSFS RVNTVYLVIA TLIMLTFWIL 
KALKLKVLTH VLGGKVSTYK VFTIYLASAF VSHVTPSTSG GLPFQIYFLH REGLPLGKTT
ALTVLDGIIT FLFFIIATPF LLLLWGEYLN LGPKIAGLFH IAMWLVILFI VISFILIFNA
SKAKVFVNWL VNLRWVKKYF KDETLLKFKN FIEKEVDYFN EGIKILFKNK RDMFLVIFYT
ILYWFFYLSL APVLLLGLGI KIAIPPIILA QLVFNFIQPV IPTPGGSGGA ELGFAYLFKF
MVPNYLLGIF VAIWRFFMFY SSLIVGGLYF IKLVRGTDYL EK