Gene Hore_17140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17140 
Symbol 
ID7313232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1830563 
End bp1831978 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content40% 
IMG OID643612161 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_002509458 
Protein GI220932550 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAT TTTATGGAAT AGAATTGGGA AAAAGAGCTT TACAGGTTCA GAAAAAATCA 
CTTGATGTAA CAGGTCATAA TATTGCCAAT GCCAATACAG AGGGCTATTC CCGGCAGAGG
GCGGTTCATA CCACAACCGA TCCCTATACC GTTCCCGGGT TTACAAGCCC GGCCGGGGCC
GGCCAGGTAG GAACCGGAGT TAAAATTGAA CAGATAGTAA GGTTAAAGGA TGATTTTATT
ACTTCCCGTA TTAATAATGA AACCCAGGAT CTGGGGGCCT GGGAGGCCCG TAAGGATAAT
TTACACCAGA TTGAACTTAT TTTTAATGAG CCGTCTGAAA ATGGACTAAG AAATCTGATG
GATTTATTCT GGTCAAGCTG GCATGAATTA TCATTAAACC CCGAAAGCGA AGGGGTCAGG
TCAACTGTCC GGGAACAGGC AAAAACCCTG ATAGAGGGTT TTAAGAGTAC ATATAACCAA
TTAATCCAAC TTAAAGATGA TATCAACCAT GATATTGATG TAAATGTTCA GAGGGTTAAT
ACCCTGGGTG AAAAAATTGC CATGTTAAAC AAGAGAATTG TAGCGGTAGA ATCTGATCCC
CAGAAGAGAG CCAATGATCT CAGGGATAAA AGGGACCTGC TGGTAAAAAA GTTAGCAAAG
TATATTAATG TACAGGCCCA TGAAGATGGT CAAGGCAATT TGAACCTCAG TATCGGCGGA
GTTTCTTTTG TGACCGGGGA TACATTTCAT AAAATAGAGC TGGAGGAAAT TACTCTACCA
GGTACTACCA GTTATAAAGT TGTTAAACCA GTCTGGAGTC ATATTAACAG TGATGTGACT
ATTACTTCAG GCAAGATAAA AGGCGCCATG GATGTAAGGG ATAAGGATAT AATCCAATAT
ATTGATAAGC TTAATGAACT GGTAGAAGGT ATTGTTACTG AAGTTAACAG TATCCATTCT
TCTGGTGAGG ATCTCAATGG AAATACTGGT GTAGACTTTT TTGATTCCAG TAAGACCACA
GCCGACACCA TGTCCCTCGA CTCGGCGATT GAATCTGACC TTAATGCTAT AGCTGCTGCA
CAAACAGGTG GTGGTGTTGG TGACGGCAGG AATGCTGAAG CCATAGCTGA ACTACAGAAT
GCATTAACTA TGTCCGGTAA TAAATCTACC TTTAATGAAT TTTATACCTC CATTATCTCA
GGTTTAGGTG TCGAAGCTGA AAAGGCCAAT ATGATGTATG ATAACCAGGA AGTAATGATC
AATAACCTTG AGAATAAACA GGCCAGTATA TCAGGAGTTT CCCTGGATGA AGAGATGGCC
AATATGATTA AATTTCAGCA GGCCTATAAT GCTGCTGCCA AGATGGTTTC CAAAGTTGAT
GAAATGCTCA ATACTTTAAT CAATGGTATG ATATAA
 
Protein sequence
MSTFYGIELG KRALQVQKKS LDVTGHNIAN ANTEGYSRQR AVHTTTDPYT VPGFTSPAGA 
GQVGTGVKIE QIVRLKDDFI TSRINNETQD LGAWEARKDN LHQIELIFNE PSENGLRNLM
DLFWSSWHEL SLNPESEGVR STVREQAKTL IEGFKSTYNQ LIQLKDDINH DIDVNVQRVN
TLGEKIAMLN KRIVAVESDP QKRANDLRDK RDLLVKKLAK YINVQAHEDG QGNLNLSIGG
VSFVTGDTFH KIELEEITLP GTTSYKVVKP VWSHINSDVT ITSGKIKGAM DVRDKDIIQY
IDKLNELVEG IVTEVNSIHS SGEDLNGNTG VDFFDSSKTT ADTMSLDSAI ESDLNAIAAA
QTGGGVGDGR NAEAIAELQN ALTMSGNKST FNEFYTSIIS GLGVEAEKAN MMYDNQEVMI
NNLENKQASI SGVSLDEEMA NMIKFQQAYN AAAKMVSKVD EMLNTLINGM I