Gene Hore_16780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16780 
Symbol 
ID7313196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1799619 
End bp1800422 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content44% 
IMG OID643612126 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002509423 
Protein GI220932515 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000859777 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGT CGACTTTAAT TGGTATCCTG ACAGGAATAG TCCTCCTTGG TGGCGCTATC 
ATTATGGGAG GAAATGCAGT TATTTTCCTC AGTGTTCAGT CACTGATGAT TGTTCTTGGG
GGAACACTGG CCGGGACAAT GGTAAGTTAC TCTTTTAACG AATTAAAGAA AATACCATCA
TTAATAAGGG TGGCCTTTCA GGAACATACT CTTGATTCAG ATGAAATAAT AGATATACTT
GTTGGTTTTG CTGAAAAGGC CAGGCGTGAG GGTTTGCTGG CCCTGGAGCA GGATGTCATG
GAAATAAATG ACCCGTTTTT ACAAAAGGGT ATTCAGCTGG TAGTTGACGG TACAGATCCC
GAGCTTGTCA GAAACATCCT TGAAACAAAA CTTACCTTCC TTGAAGAAAG GCATCAAAAA
GGGCGAGGAC TCTTCAGTAC CATGGGTCAG CTGGCTCCGT CATTTGGATT AATCGGGACC
CTCATCGGTT TAATCCAGAT GTTAAGCCAG CTTGATGATC CGACCAATTT AGGTTCTGGT
ATGGCTGTAG CCCTTATTAC TACCCTTTAT GGTGCCCTCC TGGCAAACCT TTTATTTAAT
CCGCTGGCAG GTAAGTTGCG GATAAGGAGT CTTGAAGAGG TACTGTTAAA AGAAGTTATG
ATTGAAGGGG TTTTGTCCAT TCAGGCCGGT GAAAACCCGA GGATAGTAAG AGAAAAGTTA
AATGCCTTCC TGGCTACTGA AAGAGAAAGG ATTGCTTCGG AGGCACCCAG GTTCGAAGAG
ATGGCGGTGG GTGAAAATGC CTAA
 
Protein sequence
MDLSTLIGIL TGIVLLGGAI IMGGNAVIFL SVQSLMIVLG GTLAGTMVSY SFNELKKIPS 
LIRVAFQEHT LDSDEIIDIL VGFAEKARRE GLLALEQDVM EINDPFLQKG IQLVVDGTDP
ELVRNILETK LTFLEERHQK GRGLFSTMGQ LAPSFGLIGT LIGLIQMLSQ LDDPTNLGSG
MAVALITTLY GALLANLLFN PLAGKLRIRS LEEVLLKEVM IEGVLSIQAG ENPRIVREKL
NAFLATERER IASEAPRFEE MAVGENA