Gene Hore_16750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16750 
Symbol 
ID7313193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1797428 
End bp1798432 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content42% 
IMG OID643612123 
Productflagellar motor switch protein FliM 
Protein accessionYP_002509420 
Protein GI220932512 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000123486 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG TATTGAGTCA GAGTGAAATA GATTCGTTAC TATCTGCCCT GTCATCCGGT 
GATGTGGATG TCGAGGAGAT AAAAAAAGAG ACAGAAGAAG AAAAGGTAAA GGTTTATGAT
TTTCGGCGCC CCGATAAGCT GTCTAAAGAA CAGATGAGAA CCCTGGAAAT GATCCATGAA
AACTTTGCCC GAATCCTGAC CACTACCTTA TCCACCCAGC TCAGGAGTAG AGTCGATTTT
GAGGTGGCTT CTATTGAACA GTTAACCTAT GAAGAATTTA TCCGGTCTCT ACCAGAACCG
ACCATTATCG GTATCAGCGA GATGGAGCCC TTTAACGGAC AGTTTATCTT TGAAATAAAC
CCTGATATTG GTTTTGCTAT CATTGACAGG TTATTCGGGG GAATGGGGAA TCCCCTGGAC
AGGGTCAGGA CCTATACAGA TATTGAAAAG GTTGTTTTAC GAAAGGTAAT ATCCTGGTTT
TTGAGTGGTT TACCGGAAGC CTGGGAAAAC ATTATCAGGG TTAAACCGAG GTTAAGGGAA
ATAGAGTCCA ACCCTCAGTT TACCCAGGTT GTTCCCAGTA ATGATATGAC TATCCTGATT
ACCATGTCAG CCAAGATAGC AAATAGTGAA GGTCTGGTAA ATGTCTGTAT TCCCTACATC
ATGATAGAAC CCATTGTACC ACAATTAAAT GCCCAGCAGT GGTTTTCCAA TACCAGGGAA
GAAAGAACAG CCCAGCATAT TGAGGCTATC AAGAAGAAAC TTAAGCGGGC CCCTCTTGAG
GTTATTGCTG AAGTAGGGAA AACCCAGCTT ACTGTTACTG ATTTACTATA TCTTCAACCC
GGTGATGTCA TCAGGCTAGA CAAAAAGGCC GAAGAAAAGG TTGATATACG TATCGGGAAA
AACGTTAAAT TTCAGGGGGT TGCCGGGGTT AGTAATAAAC ATATGGCTGT AAAAATTACT
GATGTTATCA GTAATGAAGA GGAAGGTGAA GAGAATGATG GATAA
 
Protein sequence
MADVLSQSEI DSLLSALSSG DVDVEEIKKE TEEEKVKVYD FRRPDKLSKE QMRTLEMIHE 
NFARILTTTL STQLRSRVDF EVASIEQLTY EEFIRSLPEP TIIGISEMEP FNGQFIFEIN
PDIGFAIIDR LFGGMGNPLD RVRTYTDIEK VVLRKVISWF LSGLPEAWEN IIRVKPRLRE
IESNPQFTQV VPSNDMTILI TMSAKIANSE GLVNVCIPYI MIEPIVPQLN AQQWFSNTRE
ERTAQHIEAI KKKLKRAPLE VIAEVGKTQL TVTDLLYLQP GDVIRLDKKA EEKVDIRIGK
NVKFQGVAGV SNKHMAVKIT DVISNEEEGE ENDG