Gene Hore_16670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16670 
Symbol 
ID7313185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1789799 
End bp1790869 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content39% 
IMG OID643612115 
ProductGTP-binding signal recognition particle SRP54 G- domain protein 
Protein accessionYP_002509412 
Protein GI220932504 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTA AAAAATATGT AGGAGACACG ATCCAGGATA CTATCTTTAA GGTCAAAGCC 
GATTTAGGCC CTGATGCCAT AATTTTAAAT ACCCGTAAAT ACAAACAGGG TGGGTTTATG
GGGTTATTTT CCCGGACAAA GGTTGAAGTC CTGGCCGCCC TTGAGGATAA AAAAACATCC
CACCGGGATG AAAATTCGGA GAAGGCCTTG AAGGAGATTA ATAACCTGAA GAAAATGGTT
CAGGCAATGA ATGAAAAATG GGAATCTGAT TCCTTTTTAA ATAAACTACC TGATAATTTG
TCTTCAATTT ACAAATACCT GGTCAATCAG AGGGTGGACA AAGGGTACTG TCAGGAGTTA
ATGAAAAAGC TTAAAAATGC CAGTGTAGAT AGTCAGAAAT CATTAATATC ACTACTTGAG
CGCAAACTGA ACCAGGTTAT AGGTAATCCT GAACCCATCA GGGTTAATAG AAATGAGCAA
AAGGTTGTAT TATTTGCCGG ACCGACCGGA GTGGGGAAAA CGACCACTAT AGCAAAGCTG
GCCGCCCGGT TTGCCCTGGA TAAGGAAGTT AAGGTGGGGT TAATAACAGC TGATACCTAC
CGTATTGCAG CCGTTCAGCA GTTACAGACC TATAGTGATA TTATAAACAT TCCTTTACAT
GTTGTTTACA ATGAAAGGGA ATTGAGCCAG ATTATCCGGG ACAAGCTGAA AAAATACCAG
CTAATCCTGG TAGATACGGC CGGTAGTAGC TGGAATGACC AGCTCCAGCT GGGGAGATTG
AAGAAGTTTG CCAGCCGGAA TTATGTTGAT GAAATTCATT TATTGATAAG TATGAGTACC
AAAAGTGAAG ATATAAAAGG TATTTTAAAG AAGTTTTCTA TAATTAAGCC TGATAAGCTT
TTATTAACCA AACTTGATGA AACAACAACC TATGGTGATA TAGTTAATAT CAAAAGAGAG
TATAAATTAC CCTATTCCTA TATTACATAT GGGCAGGATG TCCCTGATGA TATTAAGCCA
GCCCGGAAAG AGGAGTTAAT ACAGTATATA TTAGGTGATT TAAATGGTTG A
 
Protein sequence
MRVKKYVGDT IQDTIFKVKA DLGPDAIILN TRKYKQGGFM GLFSRTKVEV LAALEDKKTS 
HRDENSEKAL KEINNLKKMV QAMNEKWESD SFLNKLPDNL SSIYKYLVNQ RVDKGYCQEL
MKKLKNASVD SQKSLISLLE RKLNQVIGNP EPIRVNRNEQ KVVLFAGPTG VGKTTTIAKL
AARFALDKEV KVGLITADTY RIAAVQQLQT YSDIINIPLH VVYNERELSQ IIRDKLKKYQ
LILVDTAGSS WNDQLQLGRL KKFASRNYVD EIHLLISMST KSEDIKGILK KFSIIKPDKL
LLTKLDETTT YGDIVNIKRE YKLPYSYITY GQDVPDDIKP ARKEELIQYI LGDLNG