Gene Hore_16650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16650 
Symbol 
ID7313183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1788277 
End bp1788927 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content40% 
IMG OID643612113 
Producttype IV pilus assembly PilZ 
Protein accessionYP_002509410 
Protein GI220932502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA CGCCGGAAAG GTTAAAAGTA AATCAAAAAG TAGAACTTGA AGTAGACAGA 
CCGCCCTATG AGGGAAAATA CCTGAGCAAG ATAGCTTCAG TAACCGGAGA ATATATAAAA 
GTAACCCCTC CTTTTGTTAA AGGAGAAATA ATGCCCCTCA GGGTTAATCT CCCTGTAAAG 
GTTTATTTTA ATGACAAATA CGCAGCTTAT TATTTAAATA CAGTTATTGT GGACAGGGAG 
AAGGAACCGG TTCATTTGTT AGTGTTAAAG AATACAGGGG ATTACAGGAA GATACAGAGG 
AGGGAGTTCT TCCGGGAAGA GGTCAAAAGA AAGGTTAAAT ACCGGGCTCT GGATGATAAT 
TTACATCCAG TTGAACCCTT TAGTGAGACC TATACCATTG ATATCAGCGG TGGGGGTATT 
AAAATGGCAG TAGATAAAAT GCTTCCACTG GAAGGTAAAG TGGAGCTGTT ACTGGACTTG 
CCCGGACTGG AAAGAAGCAG TATAATAGGT AAGGTTGTAA ATCAGTATGG AAATGAAGAT 
CCCCCGGCCG TGGGTGTTAA GTTTACAGAT ATTGATCATC AATCCAGAGA GAAGATAATC 
AGCTGGTTAT TTGAATACCA GAGGGAGCTC AGGCAGAAAG GATTGTTATA A
 
Protein sequence
MNKTPERLKV NQKVELEVDR PPYEGKYLSK IASVTGEYIK VTPPFVKGEI MPLRVNLPVK 
VYFNDKYAAY YLNTVIVDRE KEPVHLLVLK NTGDYRKIQR REFFREEVKR KVKYRALDDN 
LHPVEPFSET YTIDISGGGI KMAVDKMLPL EGKVELLLDL PGLERSSIIG KVVNQYGNED 
PPAVGVKFTD IDHQSREKII SWLFEYQREL RQKGLL