Gene Hore_16570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16570 
Symbol 
ID7313175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1781979 
End bp1782767 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID643612105 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_002509402 
Protein GI220932494 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC
[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.413061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAG CTTTATGGAC TGCGGCAACA GGAATGGATG CCCAGCAGAC GAATATTGAT 
ACGATTTCAA ATAACCTGGC CAATGTCAAT ACCACTGGAT TTAAAAAAAC CCGGGTTAAT
TTTCAGGACC TGATGTATCA GCATATCAGG CAACCGGGGA CACCAAACAG CCAGGGAGGG
CAAATTCCAG TTGGAATAGA AGTGGGTCAT GGTGTTAAGG TTTCAGCGAC CCAGAAGATT
TTTTCACCGG GGAACATTCA GAATACTGAT AACCCCCTGG ATATTTTAAT TGAAGGTGAT
GGTTTCCTTC AGGTTCTGTT GCCCGATGGA ACCCTTGCCT ATACCAGAGA TGGTTCTTTA
AAGAGGGACA GTATGGGTCG GATTGTTACT TCTGATGGTT ATCCTATTCA ACCCGAGATA
TATATTCCGG AAGACGCCAG CAGTATCAGT ATTACTTCAG ATGGTACCAT AGCTGTTGAG
ATTAATGGCA GTAATCAGCC CCAGCAGATA GGGCAGATTG AACTTGCCCG GTTTTCCAAT
CCAGCCGGTT TGAATAGTAT TGGACGGAAC CTGTTCAAAC CAACCGTGGC CTCCGGTGAT
CCTATTGTAG GAACTCCGGG TAGTCCCGGG TTTGGAACCA TTGCCCAGGG TTTTCTGGAA
ATGTCCAATG TCAAGGTTGT CGAAGAAATG GTAAATATGA TTGCTGCCCA GCGGGCTTAT
GAAATTAATT CCAAGGCTAT TCAGGCAGCT GATGAAATGC TCAGAACTGC ATCCCAGTTG
CGCCGGTAA
 
Protein sequence
MIGALWTAAT GMDAQQTNID TISNNLANVN TTGFKKTRVN FQDLMYQHIR QPGTPNSQGG 
QIPVGIEVGH GVKVSATQKI FSPGNIQNTD NPLDILIEGD GFLQVLLPDG TLAYTRDGSL
KRDSMGRIVT SDGYPIQPEI YIPEDASSIS ITSDGTIAVE INGSNQPQQI GQIELARFSN
PAGLNSIGRN LFKPTVASGD PIVGTPGSPG FGTIAQGFLE MSNVKVVEEM VNMIAAQRAY
EINSKAIQAA DEMLRTASQL RR