Gene Hore_16500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16500 
Symbol 
ID7313167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1774084 
End bp1774560 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content38% 
IMG OID643612097 
ProductRfaeE domain II 
Protein accessionYP_002509394 
Protein GI220932486 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000908825 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA AAATTCAGGA TATAAATTCT TTGCAAACGA TTGTTCAAAC CTTAAAACAG 
GGAGGGAAAA CCCTGGTTTT TACCAATGGT TGTTTTGACC TCATTCATGT GGGCCACATC
CGGTATTTAT ACAGGGCCAG ATCATTTGGT GATATTTTAA TAGTGGCTGT CAACAGTGAT
AGTTCGGTCC GTCAGTTAAA GGGAGAAAAC CGTCCCATTA TAAATGAAAG GGAAAGGGCC
GAGTTACTTT CAGCCCTTGA AATGGTAGAT TATGTATTTA TATTTGATGA GCTTACCTGC
TCTAATGTTA TTAAAGAAAT CAAACCAGAT GTTTATGTAA AAGGAGGTGA CTATACCCTG
GAGACCTTAC CCGAATGGCC GGTGGTTAAA GAACTGGGTA GTCGGGTAGA GCTCGTTAAG
GAAGTCAAGG GGAAATCAAC AACGGAAATT ATAAATAAAA TAAAGTCTCA TACTTAA
 
Protein sequence
MRNKIQDINS LQTIVQTLKQ GGKTLVFTNG CFDLIHVGHI RYLYRARSFG DILIVAVNSD 
SSVRQLKGEN RPIINERERA ELLSALEMVD YVFIFDELTC SNVIKEIKPD VYVKGGDYTL
ETLPEWPVVK ELGSRVELVK EVKGKSTTEI INKIKSHT