Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_16490 |
Symbol | |
ID | 7313166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1773135 |
End bp | 1773758 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643612096 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_002509393 |
Protein GI | 220932485 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000101762 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAATA AGCAGGGAGA AGAAGAGATT ATCAGGCAGG CCCAGAATCG AAACAGGCGT GCTATTGAAT ATTTGATTAA TTCCAATATG GATATAGTTT ATGCAAAGGC CAAATACTTT TTTATCAAGG GGCTAGATAA AGATGATGTT ATTCAGGAAG GAATGGTTGG CCTGTTTAAG GCGATCCGCG ATTTTAAATT TGAAAAAGGA GCCTCGTTCC GTGGCTTTGC CCAGCTATGT GTCCATAGAC AGCTCGTTTC TGCTATTAAA AGAGCCAACA GACAAAAACA CATCCCCCTT AACACCTCAA CTTCAATAGA CCGTTCTATT GATAACAGTG AAAATGGCAG GAGTTATAAC GATATATTAC CCAATGAAGA TGAAAACCTT GAAGAGAAGT TTATATACCA GGAGCAGCTA AAAATGATTT TTGAAGATAT TGAAAAGGAA TTAACTGAAC TGGAACGGGA AGTTTTTATG CAATACCTGG CCAATAAGTC ATACCAGGAA ATTTCAAATC AGCTTGAAGT TAATCTTAAA ACGGTTGATA ATGCCCTGCA ACGGGCCCGG AAAAAGATAG AACGGATTAA ACGTAATTAT AATATTAATG ATTTGGTTGG TTAA
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Protein sequence | MVNKQGEEEI IRQAQNRNRR AIEYLINSNM DIVYAKAKYF FIKGLDKDDV IQEGMVGLFK AIRDFKFEKG ASFRGFAQLC VHRQLVSAIK RANRQKHIPL NTSTSIDRSI DNSENGRSYN DILPNEDENL EEKFIYQEQL KMIFEDIEKE LTELEREVFM QYLANKSYQE ISNQLEVNLK TVDNALQRAR KKIERIKRNY NINDLVG
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