Gene Hore_16120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16120 
Symbol 
ID7312648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1727844 
End bp1728647 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content40% 
IMG OID643612059 
ProductCof-like hydrolase 
Protein accessionYP_002509356 
Protein GI220932448 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT ATAGAATGGT AGCTATGGAT CTGGATGGAA CCCTGATTGA TGAGAATCAG 
AATCTAAGTC AGGTTACAAT TGATGTTATA ACTGAGCTTA TGAACCGGGG AGTAATATGT
GTTATCGCCA CAGGCAGGAT GTTTATTTCG GCTCTACCTT ATGTAAGAAA GCTGGGGATA
AAAAAACCGG TTATTACCTA TAACGGAGCC TTTATCAAAG ACCCTGTGAC CAATAAAGTT
TTACATCATA AACCAATTCC ACTTAATCTG GCAGGACAGG TTATCAAAAT TACTGAAGAA
TACGGTAACC ATATAAATCT CTATGAAGAT GACCGGCTTC TGGTTGCCAG GCGGAATGAA
GAAACCCTGT TATATGAAGA TATAGCCGGG GTTAAGGCCC GTGAAGTTGG TCCCCTTTCA
GATTATCTTG GAAAACCACC CACCAAGTTG TTAATAATTG AGAGGGATAG GGATAAATAC
GAGGCTATTT ACAGGGAAAT AAGATTACAA TTGGAAGATG ACCTGGCCGT AACCAGGTCA
CGGGATATAT TTATTGAAAT CATGGGAAAA GAGATTTCTA AAGGTAAAGC TTTAGAAAAA
GTTGCATCTG GTTTTGAAAT CCCCCTGTCA CAGGTTATAG CCATCGGGGA TAGCTGGAAT
GACCTGGAAA TGATTAAAGC TGCGGGACTG GGGGTAGCCA TGGGTAATTC CCCGGAACAG
ATTAAAGCAG AGGCGGATTT AGTGACATTA TCCAATAAAG AAAATGGAGT TGCCAGGATA
TTAGAAAAGG TATTATTACA CTAG
 
Protein sequence
MKEYRMVAMD LDGTLIDENQ NLSQVTIDVI TELMNRGVIC VIATGRMFIS ALPYVRKLGI 
KKPVITYNGA FIKDPVTNKV LHHKPIPLNL AGQVIKITEE YGNHINLYED DRLLVARRNE
ETLLYEDIAG VKAREVGPLS DYLGKPPTKL LIIERDRDKY EAIYREIRLQ LEDDLAVTRS
RDIFIEIMGK EISKGKALEK VASGFEIPLS QVIAIGDSWN DLEMIKAAGL GVAMGNSPEQ
IKAEADLVTL SNKENGVARI LEKVLLH