Gene Hore_16000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16000 
Symbol 
ID7312636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1715741 
End bp1717369 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content39% 
IMG OID643612047 
Producthypothetical protein 
Protein accessionYP_002509344 
Protein GI220932436 
COG category[S] Function unknown 
COG ID[COG1543] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAAAG GATTTTTAGC TCTAATTTTA CACGCCCATT TACCTTTTGT TCGCCATACT 
GATGGTGAAG GAAAACTTGC TGAAGACTGG TTATATGAAG CTATAACAGA AACTTATATA
CCCCTTTTAA ATATAATGGA AAGGCTTCAT AAAAAAGGGG TTAATTTTCG TTTAACCCTG
AATATTAGCC CCTCACTGGC TTCTATGCTG GATGATGAAC TCTTACAGAA GCGCTACCTC
AACCACCTCG AAAACCTGAT AGAACTGAGC GAAAAGGAAA TAGAAAGAAA CAGTAACACA
CCCCGGGTTA AAAAACTGGC TGAAATGTAT AATTACCTTT TCAAAGAGGC CCGGTATGTT
TTTCATGAAA AATATAAAAA TAATATTTTA AAAGGTTTTA AAAAGTTTCA AGAGCTAAAC
AGGCTGGAAA TAATTACTTC AGCAGCAACC CATGGTTACC TGCCTTTGAT TTTAACCGAA
AAAGCCGTCA ATGCCCAGGT GGCAACAGGT ATAAATACCT ATGAGCGTAT TTTTGGACAA
AAACCAAAGG GGTTCTGGTT GCCGGAATGT GCCTTCAAAC CTGGAATTGA TGCCATACTG
GCCGATAAAG GTATAAGGTA TTTTATTAGT TCTACCCATG GCATCCTTTA TGCAACACCA
AGACCCCGTT ATGGGGTATA TTCACCTGTT TATACACCAA ATGGAGTTGC TGCCTTTGGT
AGAGATGTAG AAACCTCAAA ACAGGTCTGG AGTGCCAACG AAGGTTACCC CGGTGACTTC
GACTACCGGG AATTTTACCG GGATATCGGT TTTGACCTTG ATTATGATTA CATAAAAAAA
TACCTCCCTG ATGGTATCAG GAAACATGTC GGAATTAAAT ACCATAGAAT AACGGGCAAA
AGTGATTATA AAGAGCTTTA TGACCCCGAC AGGGCCCGTG AAAAAGCAGC AGAACATGCC
GCCAACTTTA TATTTAATCG CCAGCACCAG ATTAAATACC TGAGTCAGGT TATGGATAGA
AAACCTGTAG TTGTGGCCCC CTATGATGCT GAATTGTTTG GACACTGGTG GTTTGAGGGG
CCACAGTGGC TTGAATTCCT TTTAGAAAAA ATACACTATG ATCAGGAGGA TTTTACAACA
ATTACTCCCT CTGAATACCT TGATTTATAC CCCCGCAACC AGGTCGCCAT GCCCGCTGAA
TCAAGCTGGG GTTATAAAGG ATATCATGAA GTCTGGCTCA ATGGCAGTAA TGACTGGGTT
TACCGCCATT TACACGAGGC TGAATTAAAA ATGATCACCC TTGCCGATAA ATATAACCAC
TTAGAAGATA AAGATAATAT ATTTTACCGG GCCCTGAACC AGATGGCCAG AGAACTCCTT
CTGGCCCAGA GCAGTGACTG GGCCTTTATT ATAAAGACCA ATACCATGGT CGAATATGCA
ATTATGAGAA CAAAAAAACA CCTTTTTAAT TTCAGGAAAC TCTCAAACCA GGTAGAAGGT
AAAAATCTTG ATAAAGATTT TCTCAGTAAC CTGGAAAAAA GTAACAATAT TTTTCCCGAA
ATTGATTTCA AAATATATAA CCAGAATATT AATAAAGGAT GGGATCTAAA GGAGGGTATT
TCAGGATGA
 
Protein sequence
MSKGFLALIL HAHLPFVRHT DGEGKLAEDW LYEAITETYI PLLNIMERLH KKGVNFRLTL 
NISPSLASML DDELLQKRYL NHLENLIELS EKEIERNSNT PRVKKLAEMY NYLFKEARYV
FHEKYKNNIL KGFKKFQELN RLEIITSAAT HGYLPLILTE KAVNAQVATG INTYERIFGQ
KPKGFWLPEC AFKPGIDAIL ADKGIRYFIS STHGILYATP RPRYGVYSPV YTPNGVAAFG
RDVETSKQVW SANEGYPGDF DYREFYRDIG FDLDYDYIKK YLPDGIRKHV GIKYHRITGK
SDYKELYDPD RAREKAAEHA ANFIFNRQHQ IKYLSQVMDR KPVVVAPYDA ELFGHWWFEG
PQWLEFLLEK IHYDQEDFTT ITPSEYLDLY PRNQVAMPAE SSWGYKGYHE VWLNGSNDWV
YRHLHEAELK MITLADKYNH LEDKDNIFYR ALNQMARELL LAQSSDWAFI IKTNTMVEYA
IMRTKKHLFN FRKLSNQVEG KNLDKDFLSN LEKSNNIFPE IDFKIYNQNI NKGWDLKEGI
SG