| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_15890 |
|---|
| Symbol | |
|---|
| ID | 7312625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1702664 |
|---|
| End bp | 1703590 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643612036 |
|---|
| Product | conserved protein of unknown function BmrU |
|---|
| Protein accession | YP_002509333 |
|---|
| Protein GI | 220932425 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000178842 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA CTATATTAGC TATAGTAAAT CCCGTGTCTG CCGGGGGCAG AACCGGGAAA
AAATGGCCGA AATACTTTAA AAAATTTCAA AGCTGTGGAT TATCGATAAA ACCTGTTTAT
ACCTGCTATC CCGGTCACGC TACAACCATA GTCCGGCAGG GTTTCAAAGA GGGTTACAAA
AAGGTAATGG CCGTTGGAGG AGATGGAACC ATTAATGAAG TAGTAAACGG ATTTTTTAAG
GGGAAAGACC TTATTAACCC AGAAGCCAGA TTGATTGTTT TTTCCCGGGG GACAGGCTCT
GATTTTATTA AAAGCCTGGG GATAACCAGT AAATTTAAGG ATATAATAAA CATTATTAAA
AACGGGGAAG TGGAATTTAT TGATGTCGGC CTGGTTACTT ATGTTACTCA TAAAGGGAAC
CGGGATTCCA GATATTTTAT TAACCTGGCT GATGTTGGAA TCGGCAGTGA GACCGTGTAT
GAAGTTAATA AAGGTGACAA AGTACTGGGA GGGCCCATTA CATATCTTCT TGGATTATTT
AAGGTTCTGG CCCGTTATAA GAATAAGGTT ATCAAATTGA TTGTAGATGA AAAAGAAATA
TTAAATGAAC GTATTAATAG CATCATGGTG GCCAATGGCA AGTATTTTGG TGGGGGAATA
AAAATTGCTC CGACTGCCAG TCTCCGGGAT GGATTATTTG ATCTCGTTGT TTTAAAGGAT
TTAAACCGTA AAGAGATTCT TTCAAACCTG GTTAAGGCTT TCAAGGGTCT TCATTTATCA
CACCCTAAAG TCGACAGCCT CTCCTGTCAA AAAGTAATAA TTGATTCCGG TGAGCAGGTA
CTACTGGAGA TAGATGGGGA ATCGATCGGA AGGTTACCGG CTACTTTTGA AATAATTGGC
AGGAGATTAC CTGTGTTATT GGTCTAA
|
|---|
| Protein sequence | MEETILAIVN PVSAGGRTGK KWPKYFKKFQ SCGLSIKPVY TCYPGHATTI VRQGFKEGYK
KVMAVGGDGT INEVVNGFFK GKDLINPEAR LIVFSRGTGS DFIKSLGITS KFKDIINIIK
NGEVEFIDVG LVTYVTHKGN RDSRYFINLA DVGIGSETVY EVNKGDKVLG GPITYLLGLF
KVLARYKNKV IKLIVDEKEI LNERINSIMV ANGKYFGGGI KIAPTASLRD GLFDLVVLKD
LNRKEILSNL VKAFKGLHLS HPKVDSLSCQ KVIIDSGEQV LLEIDGESIG RLPATFEIIG
RRLPVLLV
|
|---|
| |