Gene Hore_15720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15720 
Symbol 
ID7314245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1683842 
End bp1684309 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content38% 
IMG OID643612019 
ProductSsrA-binding protein 
Protein accessionYP_002509316 
Protein GI220932408 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000000205152 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGG ATAATATAAA GGTTATAGCC CGGAATAAAA AGGCAAGACA TGATTTTTTC 
ATCGAAGAAA CCTATGAATC TGGTATCATT TTAAGGGGGA CTGAAATTAA ATCTGTCCGG
GAGGGCAGGG TTAACTTAAA GGATAGCTTT GCCCTGGTTG AGAATGGTGA AGTATTCTTA
TATAATATGC ATATCAGTCC CTATAAGCAG GGGAATCGTT ATAACCATGA CCCCGGGAGG
AAAAGAAAAC TTTTACTCCA TAAGAGTGAA ATTAGAAAAC TGATCGGTAA AACTAAACAG
AGGGGTTATT CTCTGGTTCC TTTGAGTATC TATTTAAAAA ACAATCTGGC CAAGATTGAA
CTGGCCCTTG CTAAAGGTAA AAAGAAATAT GACAAACGTC AGGAAATAGC CAAAAAAACA
GCTGAACGTG AAATAAGACG GGCCTTTAAA GAAAGGCAGC GTTATTAA
 
Protein sequence
MGQDNIKVIA RNKKARHDFF IEETYESGII LRGTEIKSVR EGRVNLKDSF ALVENGEVFL 
YNMHISPYKQ GNRYNHDPGR KRKLLLHKSE IRKLIGKTKQ RGYSLVPLSI YLKNNLAKIE
LALAKGKKKY DKRQEIAKKT AEREIRRAFK ERQRY