Gene Hore_15520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15520 
Symbol 
ID7313149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1662349 
End bp1664019 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content44% 
IMG OID643611998 
Productbeta-lactamase domain protein 
Protein accessionYP_002509296 
Protein GI220932388 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGA AAATTTCTAT AATTCCTCTG GGTGGTTGTC GGGAAATAGG AAATAATATG 
ATAGTTATTG AATCTAAAAA AGACATCATA ATCCTGGATT CAGGGGTGTT ATTTCCCGAG
GATGATGACT TCGGGTATGA ACTTATAATT CCTGATATAT CCTACCTGGT TGAAAGAAAA
AAGAAAATAC GGGGTATAAT CTTCTCACAT GGCCATGAAG ACCACATTGG GGCTGTCCCG
TTTCTCCTGG AGAGAATCAA TCCTCCTTTG TTTGGCACTG ACCTGACGAT GGGATTGATA
AAAAGCAAGC TGGAAGACGC CGGCCTTATA GACAGGGCCA GGCTAAAAAC TGTCAATCAC
AGGAGCAAAT TAATCCTGGG GGATTTTGAA CTGGACTTTT GCCATGTCAA CCACAGTATC
CCGGGGGCAG TGGCCACCAG GATTAAAACC CCGGTAGGTT ATATTGTTTA CACCGGTGAT
TATAAATTTG ATCAGACCCC TGTCAACACC GGACAGACCG ATTATCAGAA ACTATCTGAC
TGGGGAAAAG AGGGAATCAG GGTCCTGCTG GGGGATAGTA CCAATGCTGA ACGGGAAGGG
CACAGCCTTT CAGAACGGGT TGTGGCTCAA AACATCGAAG AAGGATTTAA GCTTATAAAC
GGGAGAATTA TTGTAGCTAC CTTCTCAACC AATATCCACC GCATCCAGCA CATCATATCA
GCCGCCCGGA AGACCGGCCG AAAGGTTGCA GTGGCCGGAA GGAGTATGTT CAATACTATT
CAGGTAGCTG CTGACCTTGG TTATCTGGAT ATTCCACCAG GACTGTTAAT AACCCTGGAT
GAAGCCAATA AAATGGAACC TGGTAATATA GTCCTCCTGA TGACCGGGAG CCAGGGTGAA
TATGGAGCAG CCCTGACCAG GCTGTCCCGT GGAGACCACC GTGATATGGA AATCAAACCC
GGGGACACGG TTTTTATGTC AGCCAGTCCC ATTCCGGGTA ATGAAAAAGC CATCGGAAAT
ACCATTAACA GGCTTTATAG CCTGGGGGCA GAGGTTATCT ATAATGGAAT GCTGGATATT
CATGCCTCCG GTCATGCCTG CCAGGAAGAA ATAAAACTTA TGATAAATCT GACAGGACCT
GATTACCTGG TCCCGGTCCA TGGTGAATTC CGCCATCTAT TTCACCATGC CCAGCTGGCA
CGACAGGCCG GGGTTCCCGT CCAAAATATT TTAATCCCGG ACAATGGCCA GAAGATTGAT
GTTTTTCCTA AAAGGGTAAA AATGGGAAAT AAAATTGAGG TTAATAAAAC CCTTATTGAG
GGTTATCGGG TCTGTGACAA TGGAAAGGAA ATACTGGGAG AAAGAAAAAA AATGGCAAGA
CAGGGGTATA TAAATATCCT TATGTTTGTC AATAAAAACG GTGAATTAAA AAATAAACCG
GTTATTATTT CCCGGGGCTT TACCAGCAAT CGTGACTCCC GGGAACTCTT AAAAAAGGTT
AAAGAAAAAG TCCAGAAACT TATTGAAGAA TTTCAAAATA ACAGGCACGG TGACCCAGCT
GACCTGAAAT CAAGGGTCAA CTATGAAGTC AATAACCTGA TATATGATAA ATTAAAGAGG
GCCCCCCTGA TTACACCGTT TATTATCCAG GTTAATCAGG ATAGACGTTA A
 
Protein sequence
MPQKISIIPL GGCREIGNNM IVIESKKDII ILDSGVLFPE DDDFGYELII PDISYLVERK 
KKIRGIIFSH GHEDHIGAVP FLLERINPPL FGTDLTMGLI KSKLEDAGLI DRARLKTVNH
RSKLILGDFE LDFCHVNHSI PGAVATRIKT PVGYIVYTGD YKFDQTPVNT GQTDYQKLSD
WGKEGIRVLL GDSTNAEREG HSLSERVVAQ NIEEGFKLIN GRIIVATFST NIHRIQHIIS
AARKTGRKVA VAGRSMFNTI QVAADLGYLD IPPGLLITLD EANKMEPGNI VLLMTGSQGE
YGAALTRLSR GDHRDMEIKP GDTVFMSASP IPGNEKAIGN TINRLYSLGA EVIYNGMLDI
HASGHACQEE IKLMINLTGP DYLVPVHGEF RHLFHHAQLA RQAGVPVQNI LIPDNGQKID
VFPKRVKMGN KIEVNKTLIE GYRVCDNGKE ILGERKKMAR QGYINILMFV NKNGELKNKP
VIISRGFTSN RDSRELLKKV KEKVQKLIEE FQNNRHGDPA DLKSRVNYEV NNLIYDKLKR
APLITPFIIQ VNQDRR