Gene Hore_15190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15190 
Symbol 
ID7313112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1624188 
End bp1624784 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content29% 
IMG OID643611961 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_002509263 
Protein GI220932355 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAG TCAGTAACAT TAGTTTAACT CCTTCAGAGG TTATGGAGTA TTTATACTGC 
CCCCGGTTTA TATATTATAT GTCATATTTA AAAATTCCAC AACATGAAAA AAATCGGTTT
AAGGTTATGA TGGGTCGTGA TATGCACAAA AGAAAACTTA AGATTAATAA AAAATATCTT
CGAAAAAAGA TAGGGGTTAA AAAGAAAATA TTGGATAAAA AGATGTACTC AAAAAAACAT
AATATACATG GGATAGTTGA TGAGATTTTA TTCCTGGAAG ATGGTACAGC AGCACCGTTG
GATTATAAAT ACGCAAAATA TAAAAAGAGG ACTTTTCTCA CACATAAATA TCAGGCCGCC
ATGTATGGGT TAATGATTGC TGATATTTAT AATATTGAAG TTAACCGGGC CTATATTGTA
TACATCAGGA GTAAGAACCT ATTGAAAGAA ATTAAACTGG ATACAAAAAT ATACAGTAAT
GTTGGGAAAA TAATGAAAGA AATAATATCA ATTATCCAGA AAGGGTATTA TCCAGATAGA
ACTAAATACA AAAGAAGGTG TTTTGACTGT ACTTATAGAA ATATTTGTAT AAAATAA
 
Protein sequence
MVKVSNISLT PSEVMEYLYC PRFIYYMSYL KIPQHEKNRF KVMMGRDMHK RKLKINKKYL 
RKKIGVKKKI LDKKMYSKKH NIHGIVDEIL FLEDGTAAPL DYKYAKYKKR TFLTHKYQAA
MYGLMIADIY NIEVNRAYIV YIRSKNLLKE IKLDTKIYSN VGKIMKEIIS IIQKGYYPDR
TKYKRRCFDC TYRNICIK