| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_14930 |
|---|
| Symbol | |
|---|
| ID | 7313084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1591630 |
|---|
| End bp | 1592880 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643611934 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
|---|
| Protein accession | YP_002509237 |
|---|
| Protein GI | 220932329 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.743266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAT TTGGAGATGA AAAGGGTCAG TTGAAATGTT CCTTCTGCGG GAAATCCCAG
GAACAGGTCC GTAAACTGGT AGCTGGCCCC GGGGTATATA TATGTGATGA GTGTATTGAA
CTCTGTAATG AAATAATAGA AGAGGAATTA AACGATGATG TGGAGTTCAA TCTTAATAAT
ATACCTAAAC CCCGTGAAAT AAAGAAAATC CTTGACCAGT ATGTAGTCGG TCAGGAACGG
GCCAAAAAAT CACTGTCAGT GGCTGTCTAT AACCATTACA AGAGAGTAAA TTCTGATATG
AAAATAGATG ATGTTGAGTT GCAGAAGAGT AATATTTTGA TGGTAGGCCC GACCGGATGT
GGAAAGACAC TGTTAGCCCA GACACTGGCC AGAATACTGG ATGTACCCTT TGCTATTACC
GATGCCACCT CTTTAACCGA AGCAGGATAT GTTGGTGAGG ATGTAGAAAA TATTCTGCTG
AAATTAATTC AGGCTGCTGA TTATGATATC GAAAAAGCAG AACGGGGTAT TATCTATATC
GATGAAATAG ACAAAATAGC CCGGAAATCC GAAAATCCGT CTATTACCAG GGATGTTTCC
GGAGAAGGTG TTCAGCAGGC CCTCCTGAAA ATTCTGGAAG GAACAGTTGC CAGTGTACCG
CCCCAGGGAG GGAGAAAACA TCCACACCAG GAGTTTATCC AGATAGATAC TACCAATATT
CTGTTTATAG CCGGTGGTGC TTTTGATGGC CTGGATAAGA TAATTAAATC CAGGATTGAT
AATAAAGTGA TGGGTTTCGG GGCAGACATT AAGAGCAAGA CTGAAGAAAA TGTCGGGGAA
ACCCTGAAAT ATATCCTGCC TGAAGATTTA CTGCGCTACG GGTTAATTCC TGAATTTATC
GGTAGGTTGC CGGTAATTGT TACTCTGAAT GAACTGGTTG AAGAAGACCT GGTTAAGATT
TTGACCGAGC CCCGTAACGC GCTGGTTAAA CAGTACAAGA AGTTCTTTGA AATGGATAAT
GTAGAGCTTG AGTTTACTCC AGAGGCCTTA ACGGCAATTG CCCAGAAGGC CCTTGAAAGA
AATACTGGAG CCCGTGGTTT GAGGGCTGTT GTTGAAGAAG CTATCCTTGA TATAATGTAT
GACCTTCCTT CAGAACCCGG TATTGCTAAA TGTGTTATTA CACCTGAAGT AATTAAAAAC
CACAAAAACC CTGAATTAAT CAGGGTTAAG GATAAAGAAG AGACCGCTTA A
|
|---|
| Protein sequence | MFKFGDEKGQ LKCSFCGKSQ EQVRKLVAGP GVYICDECIE LCNEIIEEEL NDDVEFNLNN
IPKPREIKKI LDQYVVGQER AKKSLSVAVY NHYKRVNSDM KIDDVELQKS NILMVGPTGC
GKTLLAQTLA RILDVPFAIT DATSLTEAGY VGEDVENILL KLIQAADYDI EKAERGIIYI
DEIDKIARKS ENPSITRDVS GEGVQQALLK ILEGTVASVP PQGGRKHPHQ EFIQIDTTNI
LFIAGGAFDG LDKIIKSRID NKVMGFGADI KSKTEENVGE TLKYILPEDL LRYGLIPEFI
GRLPVIVTLN ELVEEDLVKI LTEPRNALVK QYKKFFEMDN VELEFTPEAL TAIAQKALER
NTGARGLRAV VEEAILDIMY DLPSEPGIAK CVITPEVIKN HKNPELIRVK DKEETA
|
|---|
| |