Gene Hore_14490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14490 
Symbol 
ID7313989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1539357 
End bp1539623 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content38% 
IMG OID643611889 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_002509193 
Protein GI220932285 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00608366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAG AGCATATTAA GGTAAAAAAT GAAGAGGGAT TACATGCCAG GCCTGCATCA 
AAATTTGTTA AAAAGGCAAA TAGTTATCGC AGTAATATTG AAATTATTTT TAAGGACCTC
AGGGCTGATG GAAAAAGTAT TATGGGGGTA ATGAGTCTGG GAATCAGGAG GGGTGACAAA
ATTACCCTGA AAATAGACGG GCCTGATGAA GAAAAGGCCC GTCAGGAACT AATTGATTTC
TTTCAAGCCG GTCTTGTAAA AAGTTGA
 
Protein sequence
MITEHIKVKN EEGLHARPAS KFVKKANSYR SNIEIIFKDL RADGKSIMGV MSLGIRRGDK 
ITLKIDGPDE EKARQELIDF FQAGLVKS