Gene Hore_13290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13290 
Symbol 
ID7314115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1428088 
End bp1429479 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content37% 
IMG OID643611769 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002509074 
Protein GI220932166 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000121964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC TGGGTATAAA AATTTTTTTA ATAATGTTAT CAGTAGCTAT AATGGGTTTA 
GTATTTATAG GTTTATACCT GAATTATAGC ATTCCCGAAC ATTTTAAAGA CTATCTATAC
CTGGAGAAAA AAGAAAAAAT AGAAAATCTT GTTTCGGTGC TGGAAAACAA TTACAAAGAG
ACCCGGAGCC TTAGGAATAG CCAGAGGTTA CTGTCAGAGT TCTCCCGGAT AAATAATGTA
AATTTAAAGC TTACTGATGC CAGGGGTAAT ATAATTTATA GTTCTACCCC AATGCCCGGG
AGAATGATGA AGGGTTATTG TATAACCCCT TTCAGAAGAA GAATAATGGT AGAACGAAAT
TATCCCCTCG GTTATGAGGC CTTTAACCTG TCAAATAATA ACCAAACAAT CGGGAAACTC
TACTGGTTAC GTTTTGAAGG CCCTTATATT CCCATTAAAT CCAGTTTATT CGTTAGAAAA
ATTAACAGGG CAATTATCTT TTCGGCTATA ATTATTGCCA TTATTACCAT GGTCTTTAGT
TATTTTCTAT CCCGGTATTT AACAAAACCT TTAATCAAAA TTAATAATGT AGCTAAAAAA
GTAGCCGATG GGCAGTTAGA CCACCATGTT ACTGTTAAGG GAAATGATGA AATTAAAGAA
CTGGCTACTT CATTTAATCA AATGGTTGCT AAGTTAAAAT ATCTGGAGAC AGTAAGGCGG
AAATCAACCT CAGACCTGGC CCATGAACTG CGGACCCCTC TTACCAATAT AAAGGGTTAC
CTGGAAGGAA TTAAAGAAGG GGTCCTTGAA GTTGATTCAG TTACCCTGAC CGAAATTGAC
GAAGAAATCA ATAGATTAAT AAGGCTTATA AATAGACTAA ACGACCTTGC CACGGCTGAA
AAATATATAA TTCAGGGTAA AAAGAAAAAA ATAAAACTGG CCAATTTTCT AGAAGACCTC
CTTAATTCCT ATCTCCCCCA GGCCCGGGAA AAACAGATTG ACCTTATCAA AAAATACAAC
CCGGAACAAT CTATTTTTAT AGACAGTAAT GAAGACGCCC TGAGGACGAT TTTTGGTAAC
CTTATCAATA ATTCCCTGAA ATATACCCCT GAGGGTGGTA AAATTGAAAT AACCCTCTCT
TCTAAAAAAA ATCAGGCAAT AATTAGTGTA AAGGATAATG GAACAGGTAT TTCTGCAGAA
GACCTCCCCT ATATCTTTGA GCGTTTTTAC CGGGCTGATA AATCCCGGTC TACCAGGTCC
GGGGGAACAG GAATTGGGTT AACCATTACC AGGGAGTTAG TTAACTCCAT AGGCGGAAAA
ATAATTGCCT CCAGTGAAGG AAGAGGTAAA GGTGCAACCT TTACCGTTTA TCTACCATCC
AGAAATAACT GA
 
Protein sequence
MSKLGIKIFL IMLSVAIMGL VFIGLYLNYS IPEHFKDYLY LEKKEKIENL VSVLENNYKE 
TRSLRNSQRL LSEFSRINNV NLKLTDARGN IIYSSTPMPG RMMKGYCITP FRRRIMVERN
YPLGYEAFNL SNNNQTIGKL YWLRFEGPYI PIKSSLFVRK INRAIIFSAI IIAIITMVFS
YFLSRYLTKP LIKINNVAKK VADGQLDHHV TVKGNDEIKE LATSFNQMVA KLKYLETVRR
KSTSDLAHEL RTPLTNIKGY LEGIKEGVLE VDSVTLTEID EEINRLIRLI NRLNDLATAE
KYIIQGKKKK IKLANFLEDL LNSYLPQARE KQIDLIKKYN PEQSIFIDSN EDALRTIFGN
LINNSLKYTP EGGKIEITLS SKKNQAIISV KDNGTGISAE DLPYIFERFY RADKSRSTRS
GGTGIGLTIT RELVNSIGGK IIASSEGRGK GATFTVYLPS RNN