Gene Hore_12790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12790 
Symbol 
ID7313600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1371682 
End bp1372809 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content43% 
IMG OID643611719 
Productchaperone protein DnaJ 
Protein accessionYP_002509024 
Protein GI220932116 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000108352 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAACCA GTAAAGATTA TTATGAAATT CTGGGAGTCA GCAGAGATGC CGATCAAAAA 
GAAATTAAAA AAGCATATCG CCGTTTGGCC AGAAAATACC ATCCTGATAT AAATAAAGAT
GACCCTGATG CTGAAGAGAA GTTTAAAGAG ATTTCAGAGG CATATGAGAT TCTCAGTGAT
CCGGATAAAA GGGCTCGATA TGATCAGTAT GGCCATGCCG GTATCAATGA AGAAGATTTT
AACTTTGAAG ATTTTGCGCA GAGGGGTTTT GGTGGCTTTG ATGATATATT TGATATGTTT
TTCGGTGGTG GTATGGGTCG TCGCCGCAGG GGCCCACGGC CCGGTGCTGA CCTCCAGTAC
AGGATGAAAA TACCCTTTGA AGACGCTGCA TTCGGGACTA CTAAAAAGAT TACAATACCC
CGGACTGAAA CATGTGATAC CTGTAATGGT ACCGGAGCAA AGCCCGGTAC CAGTCCTAAA
ACATGTCCCC AGTGTAATGG GAGTGGACAG GTTAGATACA CCCAGAGGAC TCCGTTTGGA
CAATTTGCCC AGACCAGAAC CTGTGACCGC TGTGGAGGTC GGGGTACTAT AATTGATGAT
CCCTGTCCTA CCTGCCAGGG TAGTGGTAAG GTTAGGAAAC AGCGGAAGAT TACGGTTAAA
ATACCACCGG GTGTAGATAC TGGAACCAGG CTCCGGATGC CCAATGAAGG TGAAGCCGGT
GATAAAGGTG CTCCCAATGG TGATTTATAT ATTATAATAG AGGTTGAACC CCATGATATA
TTTGAGCGAA AAGATGACGA CATATATTGT GAAGTACCTA TTAGTTTTGT GCAGGCAGCC
CTGGGTGATA AAATTGAAGT TCCTACTCTT GAGGGTAAGG TTAAATTTAC TATTCCTGAA
GGAACCCAGC CTGATACTGT TTTCCGCCTG AAAAACAAGG GAATTCCCCA CCTTAATGGA
AGGGGAAGAG GAGATGAATT TATAAAGGTT AGAGTAGTTA TTCCTGAAAA GATGAATGAT
GAGCAAAAGG AACTTTTAAG GAAATTTGCC GAAATTAGTG GAGATGAAAT AAATCCAGAA
CAAAAAAGCT TTATAAAAAA AGTTAAAGAT GCCTTTGGAG TGGGATAA
 
Protein sequence
MATSKDYYEI LGVSRDADQK EIKKAYRRLA RKYHPDINKD DPDAEEKFKE ISEAYEILSD 
PDKRARYDQY GHAGINEEDF NFEDFAQRGF GGFDDIFDMF FGGGMGRRRR GPRPGADLQY
RMKIPFEDAA FGTTKKITIP RTETCDTCNG TGAKPGTSPK TCPQCNGSGQ VRYTQRTPFG
QFAQTRTCDR CGGRGTIIDD PCPTCQGSGK VRKQRKITVK IPPGVDTGTR LRMPNEGEAG
DKGAPNGDLY IIIEVEPHDI FERKDDDIYC EVPISFVQAA LGDKIEVPTL EGKVKFTIPE
GTQPDTVFRL KNKGIPHLNG RGRGDEFIKV RVVIPEKMND EQKELLRKFA EISGDEINPE
QKSFIKKVKD AFGVG