| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12760 |
|---|
| Symbol | |
|---|
| ID | 7313597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1368738 |
|---|
| End bp | 1370054 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643611716 |
|---|
| Product | MiaB-like tRNA modifying enzyme |
|---|
| Protein accession | YP_002509021 |
|---|
| Protein GI | 220932113 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00265105 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA CAGTAGCATT CCACACCCTT GGTTGTAAGG TGAATCATTA TGAGACAGAA
GCCATGATGG GCATATTTGA AGAGGCCGGT TATAAAGTTG TTGATTTTGA TGACCGGGCA
GATGTTTATA TTATTAATAG TTGTACTGTA ACCAATGAAG CTGCTCGCAA ATCAAGACAG
CTGGCCCGGA AGGCCAGGCG GAAAAACCCG GAGGCAGTAG TGGCTCTGGT CGGATGTTAT
GCCCAGGTTT CTCCTGATGA GGTTAAGAAA ATAGATGCCA TTGACCTTGT TCTCGGTTCA
GATCGAAGGA AGGACATTGT TAAATTAGTT GAAGAAGTAA GGACAGGTGG AAAAGAAGTA
ACTGATGTAA AAGATTTTAA AAAGTTAACC ACCTATGAAG ACCTTAATAT AAATAAAGTA
AAAGAAACAA CCAGGGCTTA TATCAAAATT GAAGAGGGCT GTAATCAGTT CTGTAGTTAT
TGTATTATAC CCTATGCCCG GGGGCCTGTC AGGAGCAGAA AAGAGGAATC GGTTATCCAG
GAAGTTGAGA GACTTGTCCG GGCCGGGGTT AAGGAAATAG TACTGACAGG TACTCACCTG
GGAGCATATG GACTTGATGA AAATAATGAT AAAGCTCTGG TGGAATTAAT TCAGAATCTT
GTAAAAGTCA AGGGGCTTGC ACGAATCAGG TTGAGTTCCC TTGAAGTTAC CGAGGTAAAT
GATGATTTAA TCAGGATAAT GGGCAGTGAA GACAAGGTTT GTCCCCATTT GCATCTTCCA
TTACAGAGTG GGAGTAATAC TATTCTAAAA AAGATGAAGA GGCCCTATAC GGTTGAGGAG
TTTAAGGAGA CTGTTGATAA AATAAGGAAA ATAATAGAAG ATATAGCGAT AACAACCGAT
ATAATAGTTG GTTTTCCGGG TGAAGGGCAA AAGGAATTTA ATGAAAGTTA TAATACAGTA
AAGGAATTAG GTTTTAGCAG GCTTCATGTT TTCCCTTTTT CTATTAGGCA GGGTACACCT
GCTGCCAGGA TGAAAAATCA GGTTCCCGGT GATGTTAAAA AAGAATATAG CAAAAAGATG
CGTGAACTAA ATAAAAAATT AATGTTAGAG TATCAAAAAA GGTTCTGGGG TCACCTCAGG
GATGTTATTA TTGAGGATAA TCGGGACAGC AGGACTAACT TATTGACTGG AGTTACTGGT
AACTATATTA AGGTTATGAT TGAAAACGCT GATGATTCAT TGCGTGGTAA AATGTGTAAG
GTCAGGCTGG ATAAAGCCTA TAACCATGAA TATGCCATTG GAAAAGTAAT AAAATAA
|
|---|
| Protein sequence | MMNTVAFHTL GCKVNHYETE AMMGIFEEAG YKVVDFDDRA DVYIINSCTV TNEAARKSRQ
LARKARRKNP EAVVALVGCY AQVSPDEVKK IDAIDLVLGS DRRKDIVKLV EEVRTGGKEV
TDVKDFKKLT TYEDLNINKV KETTRAYIKI EEGCNQFCSY CIIPYARGPV RSRKEESVIQ
EVERLVRAGV KEIVLTGTHL GAYGLDENND KALVELIQNL VKVKGLARIR LSSLEVTEVN
DDLIRIMGSE DKVCPHLHLP LQSGSNTILK KMKRPYTVEE FKETVDKIRK IIEDIAITTD
IIVGFPGEGQ KEFNESYNTV KELGFSRLHV FPFSIRQGTP AARMKNQVPG DVKKEYSKKM
RELNKKLMLE YQKRFWGHLR DVIIEDNRDS RTNLLTGVTG NYIKVMIENA DDSLRGKMCK
VRLDKAYNHE YAIGKVIK
|
|---|
| |