Gene Hore_12710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12710 
Symbol 
ID7313592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1362833 
End bp1363465 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content38% 
IMG OID643611711 
Productputative signal-transduction protein with CBS domains 
Protein accessionYP_002509016 
Protein GI220932108 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT CTGAAAGACA GAAGGAGATA ATTCGTATCG TAAAACAGAA TGAACCTATT 
ACCAGTCAGG ATATCGCAGA AAGGCTTGGT CTTTCCCGGG CAGCCTTGCG GTCTGACCTG
GCTGTCCTGA CTGCTGCCAA TTTACTGGAA GCAAAACCAA GGGTAGGTTA TTTCTATATT
GAAAAAAAGC TGCAAATAGA TGAGGTTGAT GAACTGGTAA AAATACCCAT TAAGGATATT
ATGTCTCCTC CTGTTGTTGT TGCCGAAGAT GTAAGTATAT ATAAGTCGAT TGTAACCATG
TTTTTAGAGG ATGTCGGGAC TTTATTTGTT ATCAATGAAA ATGAAAAACT CTGTGGAGTT
ATTTCGCGAA AAGATTTATT AAAAATGAGT ATGGGTCAAA ATGATCTAAA AAGAACACCT
GTAAGTCTGG CTATGACCAG AATGCCAAAT ATCATAATAG CAACCTCCGA TGACTCCTAT
CTCGAGGCAA CCAGAAAAAT TGTAGATAAT CAGATAGATT CATTACCGGT AGTCAATGAA
GATATGGAGG TTGTAGGGAG GTTCTCCAAG ACCAATATTG CCAGGAATCT AGTCGATTTT
CTTTGTGACA ATATGAAAGG AAAGGGAGAT TAA
 
Protein sequence
MNLSERQKEI IRIVKQNEPI TSQDIAERLG LSRAALRSDL AVLTAANLLE AKPRVGYFYI 
EKKLQIDEVD ELVKIPIKDI MSPPVVVAED VSIYKSIVTM FLEDVGTLFV INENEKLCGV
ISRKDLLKMS MGQNDLKRTP VSLAMTRMPN IIIATSDDSY LEATRKIVDN QIDSLPVVNE
DMEVVGRFSK TNIARNLVDF LCDNMKGKGD