Gene Hore_12580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12580 
Symbol 
ID7313579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1351232 
End bp1351660 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID643611698 
Productconserved hypothetical protein TIGR00043 
Protein accessionYP_002509003 
Protein GI220932095 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAG TAGAGATAAA TGACAATCAG GGTATTACCG GATCCAATAA TGACATCAAA 
CAATTAATTG AAACGGTGAT TAATAAAACT GCTGAAGTTG AAAAGGCGTC GGGGACGGTA
AGTGTGGCTT TAGTAGATAA TAAAACTATT GCTGAATTGA ACAGTAAATA CAGGAATGTT
GAGGGACCGA CTGATGTTCT TTCCTTTCCA ATGGATGAAG ATATCCTGGG AGATATAATT
ATATCTATAG ATAGGGCCCG CCAGCAGGCC GATGAATATG GCCACTCTCT GGAAAGGGAA
CTGGGCTTTC TTACCGTTCA CGGTATGCTT CATTTGTTGG GTTATAATCA TAAAACAGAT
GAAGAAAAAT GTGTAATGAG GCAGAAAGAG GAGAGGGTTC TTAAAGAACT TGAGCTCTAC
CGGGATTGA
 
Protein sequence
MVKVEINDNQ GITGSNNDIK QLIETVINKT AEVEKASGTV SVALVDNKTI AELNSKYRNV 
EGPTDVLSFP MDEDILGDII ISIDRARQQA DEYGHSLERE LGFLTVHGML HLLGYNHKTD
EEKCVMRQKE ERVLKELELY RD