Gene Hore_12540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12540 
Symbol 
ID7313575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1347545 
End bp1348540 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content37% 
IMG OID643611694 
Producthypothetical protein 
Protein accessionYP_002508999 
Protein GI220932091 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AATATGGTAA GAAAGTATAC CATATTCTGC TGATTACATT ATTAATTTTA 
AATATTGTTT TAACAACCAG GGTTTTAGGC TGGATTTATC TGCCAGGAGA GGTAACCCCA
CTGGATAAAG CTAAACAGGG AGCCCAGGCA GTAATTAATT ATAGTGAAGA CCTGGCAAAG
AGCTATGGTG TTGCCAGATC TAAATCTGTT AAGGATATTC TGGCCAGATT TAAGTATGAA
ATAGAAAAAT CCAGTGACCC TGAAGAAGTA GCCAGCCTTA TGCTTGACTA TGGGAGACAG
ACCCAGGATA TTATTTTCAG AGAAGTCCAG AATAAAAGGC TTAATACCAT TCTCGACCTG
ATTAACAGAC AGGAATTACC AAAAGAGGGT AGTGTTACCA TATCAATGGT AAACGGAAAG
GTTAAATTTT ATGATCCGCG GGGTATTTTG GAGGATAAAA TCCGCAAAAA AATAAAAGAA
ATTTCCTTAA ATCAGACAGT GGAAATAGTT ATTGAAAATA AAAGGGCCCG GGTAATTACT
TCTGAAGATA TATTTAACCA GGTCGAGTAT CTACAGACAA AGATAGCTTC GCTGGAAAGG
CAATTAACTG AGATAAAAAA AGTAACAGGT TATGGTCCCT TAAGTGGGCC AGGTATAATA
ATAAAAGTGT ATGACAAAAA CGGCAATCTG GAGAAAACTG GAATTGTACA TTCTACTGAC
ATCAGGAATA TCGTTGATGA ATTAATTATT GCAGGTGCTA AAGGAGTTGA AGTAGGAGGA
CAGAGGTTAA CTGTTCATTC TGCCATCAGG TGTGTAGGCC CCACTATTCT TGTTAATAAT
AAACCTATAC CGGTTAATCC CATAGTTATT AAAGCAGTCG GGGATCCGGA GGTACTGGCA
AGCAGTTTAA ATATAGTAAG AAACCATCTT AAGGCTTTTG GTATTGAACT TAAAGTCACT
AAACAAAAGG AAATATCGCT TAAGGGGCAG AGTTGA
 
Protein sequence
MFKKYGKKVY HILLITLLIL NIVLTTRVLG WIYLPGEVTP LDKAKQGAQA VINYSEDLAK 
SYGVARSKSV KDILARFKYE IEKSSDPEEV ASLMLDYGRQ TQDIIFREVQ NKRLNTILDL
INRQELPKEG SVTISMVNGK VKFYDPRGIL EDKIRKKIKE ISLNQTVEIV IENKRARVIT
SEDIFNQVEY LQTKIASLER QLTEIKKVTG YGPLSGPGII IKVYDKNGNL EKTGIVHSTD
IRNIVDELII AGAKGVEVGG QRLTVHSAIR CVGPTILVNN KPIPVNPIVI KAVGDPEVLA
SSLNIVRNHL KAFGIELKVT KQKEISLKGQ S