Gene Hore_12300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12300 
Symbol 
ID7313931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1323877 
End bp1324902 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content39% 
IMG OID643611669 
ProductS-adenosylmethionine--tRNA-ribosyltransferase- isomerase 
Protein accessionYP_002508975 
Protein GI220932067 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000259655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTG AGGAATTTGA TTATGAACTA CCAGAAGAAT TAATAGCCCA GAAGCCTTTA 
CCTAACAGAG ATGATTCCCG GTTAATGGTT TTACACCGGA AAACTGGAGA AATTGAAGAA 
ACAGTCTTCA AAAATATTAT TAAGTTTCTG GAGCCAGGAG ATTTACTTGT TTTAAATGAT 
ACTAAAGTAA TACCTGCCCG GTTGTTTGGT GAAAAAATAC CGAGTGGGAC CAGGATAGAA 
GTCTTATTAC TAAAAAGTAT AACAGAAGGC CTCTGGGAAG TTCTGGTAAG ACCTGGTAGA 
AGGATGAAGA AAGGTAACCG GGTTTCTTTT GGTGATGGAA AACTGGTTGG TATTGTTAAA 
GATTATACCG ATTTTGGTGG TAGGATTATG CAATTTGAAT ATGACGGTGA TTTTGATAAG 
GTTATTGAAG AATTAGGGGA AATGCCACTA CCACCGTATA TAACCAGGAA AGTTGAAGAC 
AAAGGCCGGT ATCAGACGGT TTATGCCCGG AAAAAGGGAT CTGTAGCTGC CCCTACAGCA 
GGTTTGCACT TTACTGACCG ACTTCTAAAG AAAATAAAGG AACAGGGAAT TGGAATCATC 
TATTTGACCC TTCATGTGGG GCTGGGCACT TTTAGACCAG TACGTGCGGA AAATGTTGAG 
GACCATAAGA TGCATAGTGA GTATTTTGAG GTTTCAACAG ATGTGGTCAA CAGGATTAAA 
GAGACAAAAG AAAAAGGGAA AAAAGTTATT GCTGTCGGTA CTACAGTGAC CAGGGCCCTT 
GAATCTGCTG CTGTAGAAAA AAGACACCTA AAAGCCATGA GGGGCTGGAC TGATATTTTT 
ATATACCCTG GTTATAATTT TAAGGTCATA GATGGGCTTA TTACCAATTT CCATTTACCT 
AAATCAACTT TATTGATGCT GGTCAGTGCC TTTGCCGGCA AAGATATGGT TATGTCTGCC 
TATAAGTTAG CCATCAAAAA TAAATATAGA TTTTTTAGTT TTGGTGATGC CATGTTAATA 
TTATGA
 
Protein sequence
MKVEEFDYEL PEELIAQKPL PNRDDSRLMV LHRKTGEIEE TVFKNIIKFL EPGDLLVLND 
TKVIPARLFG EKIPSGTRIE VLLLKSITEG LWEVLVRPGR RMKKGNRVSF GDGKLVGIVK 
DYTDFGGRIM QFEYDGDFDK VIEELGEMPL PPYITRKVED KGRYQTVYAR KKGSVAAPTA 
GLHFTDRLLK KIKEQGIGII YLTLHVGLGT FRPVRAENVE DHKMHSEYFE VSTDVVNRIK 
ETKEKGKKVI AVGTTVTRAL ESAAVEKRHL KAMRGWTDIF IYPGYNFKVI DGLITNFHLP 
KSTLLMLVSA FAGKDMVMSA YKLAIKNKYR FFSFGDAMLI L