Gene Hore_12280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12280 
Symbol 
ID7313929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1322270 
End bp1322545 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content36% 
IMG OID643611667 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_002508973 
Protein GI220932065 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000000107658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAT TAGTAGGTTA TGTATTACCA CTTGTTATAT TGTTTGGGGT TTTCTGGTTG 
TTTTTAATCA GGCCACAAAA GAAACAGCAG AAAGAGCATC AGGAGATGCT GGCCAACCTG
GAAACTGGAG ATAAGGTTGT TACCATTGGT GGTATCAAAG GTAAAGTTAT TAAAATAAAA
GATGATATTA TCAGGTTAAG GGTTAGTTCC AATGTGGATA TTGATTTTGT CAAAAATGCA
ATTGCCCGCC TGGATAATAC AGAAGATGAA GAATAA
 
Protein sequence
MEVLVGYVLP LVILFGVFWL FLIRPQKKQQ KEHQEMLANL ETGDKVVTIG GIKGKVIKIK 
DDIIRLRVSS NVDIDFVKNA IARLDNTEDE E