Gene Hore_12140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12140 
Symbol 
ID7313915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1305972 
End bp1307744 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content41% 
IMG OID643611653 
ProductAspartyl-tRNA synthetase 
Protein accessionYP_002508959 
Protein GI220932051 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.46901e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA GTATAAATGG ACTTAAGAGA ACACACTATG CCGGAAAGAT TTCTACCCAA 
CAAATAGGTA AAAAGGTAAC TGTAATGGGT TGGGTACAGA AGAGAAGAGA TCATGGGGGA
GTAATTTTTA TTGACCTCAG GGATAGATCT GGTATTGTCC AGGTGGTTTT TAATCCTGAT
AATAATGAGC GGGCTTTTAA AAAGGCTACT GAATTGAGGT CTGAGTACGT AATTGCTGTA
GAAGGAGAGG TTGAAAAGAG GCCGGAAGGT AACATTAATC CAGACATTCC CACCGGTGAA
ATAGAAATCA GGGGAAATAG ATTAAGAATA CTGGATGAAT CTGAGACCCC TCCCTTTGAA
ATAGATGATG ATATAAATGT AGGGGAGGAT TTGCGGTTAA AGTATAGATA TCTTGACCTG
AGGAGACCCC GCATGAAAAA GAATTTAGAA CTCCGACACA GGGTCATGAA GACTACCCGG
GATTACCTTG ATGACAATGG ATTCTGGGAA GTTGAGACGC CGATTTTAAC CCGTAGTACT
CCGGAAGGAG CCAGGGATTA TCTGGTGCCC AGTAGAATTC ACCCCGGTCA TTTTTATGCC
CTGCCCCAGT CTCCCCAGCT TTTTAAACAG CTGCTAATGG TAGGTGGGGT TGAAAGATAT
TTTCAGATAG CCCGTTGTTT CCGGGATGAA GATTTAAGGG CAAATAGACA ACCGGAGTTT
ACCCAGATTG ATATTGAAAT GTCATTTATA GATAAAGAGG ATGTTTTCTC ACTGGTAAAT
GGTCTTATGA AAAGATTATT TGCCCTTGTT GATATTGAGA TTCCGGAAAA AATTCCTGTT
ATGCCTTACC AGGAAGCAAT AGATAGGTTT GGTTCAGATA AACCTGATTT AAGGTTTGGT
ATGGAACTAA AGGATGTTTC TGATGTAGTC AAAGATAGTG AATTCAGGGT TTTTAGCGGG
GTTGTAAAGG ATGGAGGTCA GGTGAAGGGC ATTAACTTTA AAGGTGGTGC CATCTCACCC
AGGAGTAAGA TTGATGGTTA TACAGATTAT GTAAAAATAT TTGGAGCTAA AGGCCTTGCC
TGGATTGCTT TAAAGGAAAA TGGTCTTAAG TCACCGATTG CCAAGTTTTT ATCTGAAAAA
GAGCTTGAAG GCATAAAAGA AAAAATGGGT GCCCAAACTG GAGACTTACT CCTGTTTGTA
GCCGATAAGC CCTCGATTGT CGCTGATGCT CTGGGGAACC TCAGACTTAA GATTGCCAGG
GAAGAGGGTT TAATTCCTGA TGGTGTTTAT AAATTTGTCT GGGTAGTTGA TTTTCCCTTG
ATGGAGTATG ATGAGGATGA AGGTCGTTAT GTAGCCAAAC ACCACCCTTT CACTGCTCCT
CTAGATGAAG ATATTCCATT ACTTGATAGT AATCCTGAAA AAATTAGATC CAAGGCCTAT
GATTTTGTAT TAAATGGTGA AGAACTGGGT GGGGGAAGTA TCCGTATTAA TAATAAAGAT
CTCCAGATGA AAGTTTTTAA TGCCTTAAAT ATAAGTGAAG AAAAAGCCAG TGACAAATTT
GGGTTTTTAT TGGAAGCCTT TAATTATGGG GCTCCACCCC ATGGCGGTAT AGCCTTTGGA
CTGGATCGTT TATTAATGGT ATTAAGTGGT TCAGAATCCA TGAGAGATGT TATTGCCTTC
CCCAAAACCC AGAAGGCATC ATCACCATTA ACAGAGGCTC CATCAACAGT TGCCGAGAAA
CAGCTTCGAG AACTCCATAT AAAAATAGAT TAG
 
Protein sequence
MAESINGLKR THYAGKISTQ QIGKKVTVMG WVQKRRDHGG VIFIDLRDRS GIVQVVFNPD 
NNERAFKKAT ELRSEYVIAV EGEVEKRPEG NINPDIPTGE IEIRGNRLRI LDESETPPFE
IDDDINVGED LRLKYRYLDL RRPRMKKNLE LRHRVMKTTR DYLDDNGFWE VETPILTRST
PEGARDYLVP SRIHPGHFYA LPQSPQLFKQ LLMVGGVERY FQIARCFRDE DLRANRQPEF
TQIDIEMSFI DKEDVFSLVN GLMKRLFALV DIEIPEKIPV MPYQEAIDRF GSDKPDLRFG
MELKDVSDVV KDSEFRVFSG VVKDGGQVKG INFKGGAISP RSKIDGYTDY VKIFGAKGLA
WIALKENGLK SPIAKFLSEK ELEGIKEKMG AQTGDLLLFV ADKPSIVADA LGNLRLKIAR
EEGLIPDGVY KFVWVVDFPL MEYDEDEGRY VAKHHPFTAP LDEDIPLLDS NPEKIRSKAY
DFVLNGEELG GGSIRINNKD LQMKVFNALN ISEEKASDKF GFLLEAFNYG APPHGGIAFG
LDRLLMVLSG SESMRDVIAF PKTQKASSPL TEAPSTVAEK QLRELHIKID