Gene Hore_12020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12020 
Symbol 
ID7313903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1297035 
End bp1297661 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content37% 
IMG OID643611641 
Productconserved hypothetical protein TIGR00257 
Protein accessionYP_002508947 
Protein GI220932039 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.226332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGG TATTTTTCAC TCCTGACAGG CAAGTGGAAG TTGTTTATAA AGTAAAGGAT 
AGTAAGTTTT ACGGTAATAT TAGCAGGGTA GATTCTGAAG AGGAGGTCAG GAAATTTATT 
AATAATATAA AATCTACATA CCATGATGCT ACCCATAATG TGTCAGCTTA TAAAATAGGA 
GAAGGTGACA GGGCTTTAAA ATATTCTGAT GACGATGGAG AACCGGCCGG TTCGTCTGGT 
CCTCCGGTTT TAAGGGCAAT AGAAGGTGAG GGTTTGACCA ATACTGTAAT AGTAGTTACT 
AGGTATTTTG GTGGTACCAA ATTAGGAATT GGTGGTTTAA TAAGGGCTTA TGGTAATACA 
GCCAGATTGG CAATAAAGGA ATCAGGAAAA AAGAAATTAA CCCTGCAATA TAAAATAAAG 
GTTTTAACAA ATTATGATAA ACTGGGGACA GTTCTGGGTC AGTCAGAGGC TTTTCACTCC 
CGGATTCTGT CAACTGAATA TGAGAATGAC AGGGTTGTAG TCACCCTTAG GATCAACCCG 
GATTTTTTTA CAAAATTTAA AGATGTATTA ATTGAACTAA CGGGAAACAG GGTTGAAGTC 
AAAAAAAGTG GAGAGGTGTA CATATAG
 
Protein sequence
MGKVFFTPDR QVEVVYKVKD SKFYGNISRV DSEEEVRKFI NNIKSTYHDA THNVSAYKIG 
EGDRALKYSD DDGEPAGSSG PPVLRAIEGE GLTNTVIVVT RYFGGTKLGI GGLIRAYGNT 
ARLAIKESGK KKLTLQYKIK VLTNYDKLGT VLGQSEAFHS RILSTEYEND RVVVTLRINP 
DFFTKFKDVL IELTGNRVEV KKSGEVYI