Gene Hore_11720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11720 
Symbol 
ID7313870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1266393 
End bp1267601 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content38% 
IMG OID643611608 
ProductChloride channel core 
Protein accessionYP_002508917 
Protein GI220932009 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000807988 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTTATG CCCATATAGT AGATAGTTTT TTAGATATTT TTATAAACAG TTTTATAAAT 
AACCGCAGGA GAAGCTATCT TATATTGATC TTACCGGCAA TTGGAGGATT TATTACTTCA
ATTATAATAT ATACTGGAAG TAAGGCAGCC AAAGGTCATG GAATACCGGC TATTCTGGAA
ACCATTGAAT CTAATAAATA CGGTCTTTCA TCTAGAGATT TGCTGGTTGA AGGGCTGGCT
TCAGCTATCA CCATTGGCTC AGGTGGTTCT GCTGGTAGAA TAGGGCCGGT GGTAGAGATC
GGGGCAGGGC TCGGGGATAT TGCAGGGAGA AAATTAAATA TGCCTCTCGG TACATACCAG
ACCCTACTGG GTTGTGGGGC TGCTGCAGGA ATTGCAGCAA TTTTTAATGC CCCGCTGGGG
GGAATTATGT TTGCTGTAGA AGTCCTATAT ACTAACCTGG AGATTAAAAG ATTAAGTTTG
ATTGTTATAA GTGCTATTAG TGCTGATGCT ATTGTAAGAA ATATATCGGG CTACAATCCT
ATCTTTGATT TGCCCCCATT TCAGTTAAAC CATCCCCTGG AATATATTTT TTATATTATA
CTGGGAATAC TGCTGGGGAT ATTCTCTAAC CTCTTTATAA AGGGGCTTTA CATGGTTACT
AACCTGTTTA ACAATTTAAA AATTAACTAC CATTTAAAAC CCATCATTGG AGGTCTGTTT
GTAGGTTTAA CCGGTTTTTT TATCCCCCGG GTACTGGGGA CAGGTATTCC TGTTATATCA
AAAGCTTTTA CAAAAAGTTA TCTATTTAAT ACTTTGATAA TATTAGCTAT TTTAAAGATA
GTGGCAACCT GCCTGACTCT GGGCTCTGGA GGTTCCGGGG GTATTTTTGC TCCTGGTTTA
CTGGTCGGGG CCTCAACAGG TCTTTTTTGT GGGGGTTTTT TAAATACATA TTTACCCGGT
ATTGTAACTT CACCTGAATC TTATGGTATT GTAGGAATGG CTGCTTTTAT AAGCGGTATA
ATAAGGGCTC CTTTAACTGC TGTTTTAATA ATCTTTGAGT TAACCGGAAA CTATTCACTG
ATATTACCAC TGTTACTGGG GGCTGTTTTA GCCAGTAATA TTAGTAAACA TATTTGCCCG
GAATCAATTT ATTCACCAAA ATTATTCTAC CGTGAAATCA GTAACTACCA AAATAAAGTG
AAATCCTGA
 
Protein sequence
MFYAHIVDSF LDIFINSFIN NRRRSYLILI LPAIGGFITS IIIYTGSKAA KGHGIPAILE 
TIESNKYGLS SRDLLVEGLA SAITIGSGGS AGRIGPVVEI GAGLGDIAGR KLNMPLGTYQ
TLLGCGAAAG IAAIFNAPLG GIMFAVEVLY TNLEIKRLSL IVISAISADA IVRNISGYNP
IFDLPPFQLN HPLEYIFYII LGILLGIFSN LFIKGLYMVT NLFNNLKINY HLKPIIGGLF
VGLTGFFIPR VLGTGIPVIS KAFTKSYLFN TLIILAILKI VATCLTLGSG GSGGIFAPGL
LVGASTGLFC GGFLNTYLPG IVTSPESYGI VGMAAFISGI IRAPLTAVLI IFELTGNYSL
ILPLLLGAVL ASNISKHICP ESIYSPKLFY REISNYQNKV KS