Gene Hore_11690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11690 
Symbol 
ID7313867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1262839 
End bp1263486 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content38% 
IMG OID643611605 
ProductTrkA-N domain protein 
Protein accessionYP_002508914 
Protein GI220932006 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00343321 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT TTGTTGTTGT AGGACTGGGA AGGTTTGGTT CAAGTGTAGC CAGGACTCTG 
GCTGAAAGTG GATATAATGT CCTGGCCATT GATAATGATG AAGAACGTGT TCAGGAACTA 
AGTAATGAAG TTACTCATGC CGTAGAAGCC GATGCTACTG ATGAGGAAGC CTTAAGAACC 
CTGGGTGTAA GAAATTTTGA CGTGGCGGTG GTCAGTATCG GTGATAATGT TCATGCCAAT 
ATTTTATCAA CCTTGATTTT AAAAGAATTA GGTGTACCCT ATGTAGTTAC TAAAGCTAAA 
GATTCCCTTC ATGGAAAGAT TTTAACCAAA GTTGGAGCCG ATAGAATTGT TTACCCGGAA 
AGGGATATGG GGGTTAGAAT TGCTCATAAT TTAACATCAT CCAATGTTCT TGATTACCTG 
GAATTTGCTC CGGATTACAG TATAGTTGAA ATAATAGCAT CACCTGAAAT GGTAGGTAAA 
AGTCTGGCCC AGCTTGAATT AAGAAGCAAA TATGGGGTAA ATGTTATGGC TATAAAACGC 
GGGAAAAACC TTAATATCAC TCCAGGTGCC AATGATAAAA TATTAGAAGG GGATGTTTTA 
ATCGTTATGG GTAAAAACGA AAACCTTGAT AAATTGAAAA AAGTATAA
 
Protein sequence
MKQFVVVGLG RFGSSVARTL AESGYNVLAI DNDEERVQEL SNEVTHAVEA DATDEEALRT 
LGVRNFDVAV VSIGDNVHAN ILSTLILKEL GVPYVVTKAK DSLHGKILTK VGADRIVYPE 
RDMGVRIAHN LTSSNVLDYL EFAPDYSIVE IIASPEMVGK SLAQLELRSK YGVNVMAIKR 
GKNLNITPGA NDKILEGDVL IVMGKNENLD KLKKV